Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1929 ATGAAGCAGTTTCTCCTCCCTCTCCTGATACTATACTATGTATTTCTATCTTCAAAGGGCAGTGCACAGCAGAATTACTCAGGAAATTCCGTACTCAGTTGTAATAACGATGATGAAAAGGGTCCTTCTTCGGCTTTCCTCTACACATGCAATGGCCTGCATAAGTCCTGCCCGGCCTTCCTCATCTTCAGAGCCCAACCTCCTTACAATACCATTCCCGCGATTTCAAATCTCACATCATCAAACCCACAAGAGCTCGCCACAATCAACCGTGTCAGTATACTCACAGTCTTCCCAACTGGCAAAAAGGTCATTGTCCCCGTAAACTGTTCCTGTAAAACTAGGGACTATTACCAAGCTGAAACCAAATATATATTGCTCACAAGCCAGACATATTTCACAGTAGCAAATGCTACGTATCAGGGATTGTCCACTTGTGATTCTCTCAAGCGTTACAATCCATATGGGGAATACGATTTGGCTCCTGGTATGGAATTATACGTGCCTCTGAGATGTGCTTGTCCAACTGGGTCTCAAACTGCCAACGGCACCACTTACTTACTCACTTACTCAGTTTACTGGGGTGACAATATATCCAGTATCGCCACAAGATTCAATGTAAGCCAAAGTTCTCTACTTGACGCCAATGTTATTTCCAACCCCACTCTTTTTCCATTCACCACTATTCTAATTCCCTTGCCGAGTGAACCTGACAGCTCAACCACCATAGATCATGATGATCAACCTGCCGCCATTTCACCTCCTCCTGTTTCCAGTACCAAAAATGGTAAGGCGAAAAGAAAACTCTACGTCGCTGCTGCCACCACAGGGGGTTTTGTCCTGCTTCTCTCCCTGATTTTATCTGCCGTGTTTCTGTTGAGAAAGAAATCAGCAAGTGTCTTTGAGTCAGACGCGAAATCAGTAAGTTTCTTCGAGTCAGACGCAATAGGAAAAACCAAGTCGGCATCTTCCGAAGATATCCGCGAGGAGATTGCAAGCATTGAGCATGTCTCCAAAGTGTACAGATTTGAGGAGATAAAGGAGGCGACTGAAAATTTCAGCACAAAGAATCGAATAGAAGGCTCTGTCTATCGCGGAGTATTTGGGAAGGACATCTTGGCTGTCAAGAAAATGAGGGCGGATGCGTCCAAGGAAGTGAATATGCTGAAAAAGATCAATCATTTCAATCTGATAAAGCTGCAAGGTTACTGTAAAAACAAGGGCTTCTTCTACCTTGTTTTTGAATATATGAAAAATGGCTCTCTGAGAGAATGGCTCGCCAAAGACAGGTCCCCAGAGCACAGGAGTTGGGCTAAGAGGATCCAGATTGCTCTGGATATTGCCAACGGACTTCAATATCTTCACGACTTCACAGAACCTTGCTATGTGCACAAGGACATTAACACTAGCAACATTCTACTAAACGAAGATATAAGGGCCAAGATTGCAAATTTTAGTCTTGCTAAAGAATCAGAGGGGGAAGTAATCCCCAGTAATTACACATCACACGTGGTGGGAACTAGGGGTTATATGGCCCCGGAGTATCTGGAGGTAGGGACGGTGAGTCCCCAAATGGATGTGTACGCCTTTGGAGTGGTGTTGTTGGAATTGATCACCGGTAAAGATTCTGTTATCGTACAAGATGGAAGAGAAGTGATGCTTTCTGCAGTCATAGCATCTCTCATGGGAAAGGAGAACGCAGAAGAGAATCTCAGTTTTTTCATCGATCCTTGCCTCGCTGGAAACGGTGGGAAAATATTTGGTCTTGAGCTAGCTAAACTAAGTCTAGCCTGCTTGATACAAGAACCGGCAAGTAGACCAGGCATGGCAGATATAGTCTCCAGCTTGTTAAAGATACATGCAAATATATGCATCAAAGAATATCACCCAGTTCACACCTGGAGAGGCCAAGCTTTGTCTCCAGAAAGAATGAGAAGCAATAAGAATGAGACTGATGTAAAGTTGCTGCCTGATGGAGACGAACGTTCAGCCTCCAACCCCACGAGGCTTAGATGA 2016 0.4449 MKQFLLPLLILYYVFLSSKGSAQQNYSGNSVLSCNNDDEKGPSSAFLYTCNGLHKSCPAFLIFRAQPPYNTIPAISNLTSSNPQELATINRVSILTVFPTGKKVIVPVNCSCKTRDYYQAETKYILLTSQTYFTVANATYQGLSTCDSLKRYNPYGEYDLAPGMELYVPLRCACPTGSQTANGTTYLLTYSVYWGDNISSIATRFNVSQSSLLDANVISNPTLFPFTTILIPLPSEPDSSTTIDHDDQPAAISPPPVSSTKNGKAKRKLYVAAATTGGFVLLLSLILSAVFLLRKKSASVFESDAKSVSFFESDAIGKTKSASSEDIREEIASIEHVSKVYRFEEIKEATENFSTKNRIEGSVYRGVFGKDILAVKKMRADASKEVNMLKKINHFNLIKLQGYCKNKGFFYLVFEYMKNGSLREWLAKDRSPEHRSWAKRIQIALDIANGLQYLHDFTEPCYVHKDINTSNILLNEDIRAKIANFSLAKESEGEVIPSNYTSHVVGTRGYMAPEYLEVGTVSPQMDVYAFGVVLLELITGKDSVIVQDGREVMLSAVIASLMGKENAEENLSFFIDPCLAGNGGKIFGLELAKLSLACLIQEPASRPGMADIVSSLLKIHANICIKEYHPVHTWRGQALSPERMRSNKNETDVKLLPDGDERSASNPTRLR 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1929 671 CDD LysM 189 231 IPR018392 -
Glsi08g1929 671 MobiDBLite consensus disorder prediction 645 671 - -
Glsi08g1929 671 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 34 - -
Glsi08g1929 671 MobiDBLite consensus disorder prediction 237 260 - -
Glsi08g1929 671 SUPERFAMILY Protein kinase-like (PK-like) 336 616 IPR011009 -
Glsi08g1929 671 Gene3D Phosphorylase Kinase; domain 1 323 416 - -
Glsi08g1929 671 Gene3D LysM domain 188 244 IPR036779 -
Glsi08g1929 671 Gene3D Transferase(Phosphotransferase) domain 1 417 629 - -
Glsi08g1929 671 Pfam Protein kinase domain 372 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1929 671 ProSiteProfiles LysM domain profile. 188 231 IPR018392 -
Glsi08g1929 671 FunFam PTI1-like tyrosine-protein kinase 3 417 629 - -
Glsi08g1929 671 SUPERFAMILY LysM domain 188 233 IPR036779 -
Glsi08g1929 671 MobiDBLite consensus disorder prediction 639 671 - -
Glsi08g1929 671 Pfam LysM domain 195 232 IPR018392 -
Glsi08g1929 671 ProSiteProfiles Protein kinase domain profile. 305 623 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1929 671 SMART LysM_2 189 232 IPR018392 -
Glsi08g1929 671 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 9 622 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1929 Glsi-ChrGlsi08 13673328 13675829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1929 1 621 Receptor kinase-like Gene Family AT2G23770 39.124 6.98e-131 397
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Glsi08g1929 Pkinase 3.2e-37 CL0016