Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1918 ATGCGAACCTTAACTCCTTTCCCAGACCTCTCCTTAAACATCAGCCCACCAGACTGTGAAGCCAAACAAGTCGAGAGCTACAAAGGATTAACAAGCAAAGCGCTTTACAACGATATGTGCTCAACCTCCGATTCTGCCAGTGAGAGTGATTTAAGCCATGAAAATGCCTTTTCCCACATTGGCTATTGTGAGCCCACTTTGAGCTTAGGCTTTAAGCTGCCAGATTTGAATCCTCATCCACTACCAAGAAACCTTACTCACCTCCACACCCACCAACCTCACATCTACGCTCCCGAGTTTAAACGAAATGCAAGAGTCATCAATGGCGTGAAAAGAAGCATCAGAGCTCCTAGAATGCGATGGACTACAACCCTTCATGCCCATTTTGTTCATGCAGTTCAGCTTCTTGGCGGCCATGAAAGAGCAACTCCAAAGTCTGTGTTAGAGTTGATGAATGTCAAAGATTTAACCCTAGCTCATGTCAAGAGTCACTTACAGATGTACAGAACGGTAAAGAGCACTGACAAATGTACAGGTCATGGGCAGACAGATATGGGGTTGAGCCAAAGGCCAGGGATTGTCGATGTGCATGGAGTCTCGGGTTGTGAGAGAGCCGATTTACCAAAACCGCTTCAAAAATCTCACAGGCAATTGCATTCCCCACCTCTTGTCTCTAATTATTTTCAGGAATCATGGCAATCATCAAGAGAGACAAGGACAAATCAAGTGAAGGCAAATGAAACCGTGCTGGGGGGTGGAGAAGGTGGAGGGCTTTCGAATTGTGTGACCTATTTGTCACATCCGGATAAGACGCTTGACCTTGAATTCAGCCTTGGAAGGCCCAATTGGAAGACAGAGCACGCCCAATCATCGACGGGGTTAACTCTTCTCAACTGAACAATGTTCAAGCCTTCAAGGCTGACCTTATGTGGGAGACTTTGGAAAAGTAGAAGCCTTCAGGTAGTGGATAAGTCCCACGACAATTGCCTCAAAGCATATGGGCTGCTAGAACGGTTTAATTTGCTTCGTCACTTCGATTCCATGGCCATGGACTCGAGAATCTCTTGGCAATCAAGCATACCATTCAGCATCCTTGGAGGCTTGCTGTTTCTCTACGTTCTTTGGTTGATATCAAGAAGCCGCCGAAACAACAGTGGAATGGCTAGAAAGGCACCACCGGAAGCTGGAAGGGCGTGGCCTGTAATTGGGCACCTCCATCTTTTAGGTGGCCCAGACCCGGCTCATGTCACCTTAGGCAACATGGCGGACAAATATGGACCGATCTTCACCATAAGGCTAGGTGTTCATCGAAATTTGGTTGTGAGCAGTTGGGACATGGCTAAAGAATGCTTTACTGTGAACGACAGAGCATTTGCTACCCGCCCTAAATATTTAGCCTTTGAAGTATTGGGCTACAACTTCAGCATGATCGGGTTCAGTCTCTACGGCCCCTATTGGCGTCATGTACGCAAGATGGCCACGATTGAGCTGCTTTCCAACCATCGCCTAGCGAAGCTCGAACATGTCAAGGAATCCGAGGTGAAGGCAGCAATGAAAGAGACATATGATATGTGGTCAAAGCAGAAGAAGATCAATGGTTCAGGGGCAGTGACTGAGATGAAGAAATGGTTTGGGGACATAGCCCTAAATGTTGTGTTCAGAATGGTGGTGGGAAAGCGTTTTGTGGGTGGGGATTGTGAGAATGAAGCCAACGAAAGGACCCGGAAAGTACTGAGAGAATTCTTCGATCTGAGTGGGTCCTTCGCGGTTTCAGATGCACTGCCGTATTTGAGGTGGCTTGATTTGGACGGAAAAGAGAAGGCCATGAAGAAGATATATAAAGAGTTAGACCGACTTGTTCAAGTATGGTTGGAAGAACACAAACGCAACAGGGATTCTGGGCAACACCAGCCAAAGCACGACTTCATGGACGTGCTTCTTTCCATCGTTGATGAAGCTCAAGTGCTTGACAGCCGAGATGCTGATACTACCGTTAAGGCTACATCCCTGACATTAATATTAGCTGGGACGGACACAACAACAGTGACGTTGACATGGGCTGTGTCTTTACTAATGAACAATCGAGAAGTGCTAGAGAAGGCAGTGCGTGAGGTGGACACACAAATTGGGAGGGAAAGGCTGGCAGTGGAAGCAGATTTGAAGAAACTAGTGTATCTGGAAGCAATAGTGAAAGAAACCATGCGGTTGTACCCAGCAGCCCCACTGAGTGTGCCGCACGAGTGTATGGAAGATTGCAGCGTGGGCGGATACCATATACCCTCGGGGACGCGGCTGTTGACAAACCTTTCAAAACTGCATCGAGATCCAGGGGTATATGAAGATCCATTAGAGTTTCGACCAGAGAGATTCCTGACAAGCCACAAGGATGTGGAGGTGAGGGGCCAGAATTTTGAGTTGATTCCGTTCGGTGCGGGCAGAAGAATGTGCCCCGGAGCCTCATTTGCTCTTCAAATCGTGCAGCTTACACTTGCTAATCTGCTGCTTGGGTTCGACATGGTCACCCCTGATAACCAACCGGTTGATATGAGCGAACAAAAAAGCCTAACCAACATGAAAGCCACCCCACTCCAACTCCTTCTCACCCCTCGTCTCTTTCCCCATGTTTATGGGTAA 2634 0.4776 MRTLTPFPDLSLNISPPDCEAKQVESYKGLTSKALYNDMCSTSDSASESDLSHENAFSHIGYCEPTLSLGFKLPDLNPHPLPRNLTHLHTHQPHIYAPEFKRNARVINGVKRSIRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKCTGHGQTDMGLSQRPGIVDVHGVSGCERADLPKPLQKSHRQLHSPPLVSNYFQESWQSSRETRTNQVKANETVLGGGEGGGLSNCVTYLSHPDKTLDLEFSLGRPNWKTEHAQSSTGLTLLNXTMFKPSRLTLCGRLWKSRSLQVVDKSHDNCLKAYGLLERFNLLRHFDSMAMDSRISWQSSIPFSILGGLLFLYVLWLISRSRRNNSGMARKAPPEAGRAWPVIGHLHLLGGPDPAHVTLGNMADKYGPIFTIRLGVHRNLVVSSWDMAKECFTVNDRAFATRPKYLAFEVLGYNFSMIGFSLYGPYWRHVRKMATIELLSNHRLAKLEHVKESEVKAAMKETYDMWSKQKKINGSGAVTEMKKWFGDIALNVVFRMVVGKRFVGGDCENEANERTRKVLREFFDLSGSFAVSDALPYLRWLDLDGKEKAMKKIYKELDRLVQVWLEEHKRNRDSGQHQPKHDFMDVLLSIVDEAQVLDSRDADTTVKATSLTLILAGTDTTTVTLTWAVSLLMNNREVLEKAVREVDTQIGRERLAVEADLKKLVYLEAIVKETMRLYPAAPLSVPHECMEDCSVGGYHIPSGTRLLTNLSKLHRDPGVYEDPLEFRPERFLTSHKDVEVRGQNFELIPFGAGRRMCPGASFALQIVQLTLANLLLGFDMVTPDNQPVDMSEQKSLTNMKATPLQLLLTPRLFPHVYG 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1918 877 FunFam Myb family transcription factor 115 173 - -
Glsi08g1918 877 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 809 818 IPR017972 GO:0005506|GO:0016705
Glsi08g1918 877 Gene3D - 116 173 - -
Glsi08g1918 877 NCBIfam myb-like DNA-binding domain, SHAQKYF class 117 170 IPR006447 GO:0003677
Glsi08g1918 877 PRINTS P450 superfamily signature 807 816 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g1918 877 PRINTS P450 superfamily signature 675 692 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g1918 877 PRINTS P450 superfamily signature 728 739 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g1918 877 FunFam Cytochrome P450 82C4 381 868 - -
Glsi08g1918 877 PRINTS E-class P450 group I signature 664 681 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g1918 877 PRINTS E-class P450 group I signature 446 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g1918 877 PRINTS E-class P450 group I signature 727 745 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g1918 877 PRINTS E-class P450 group I signature 816 839 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g1918 877 PRINTS E-class P450 group I signature 806 816 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g1918 877 PRINTS E-class P450 group I signature 422 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g1918 877 PRINTS E-class P450 group I signature 684 710 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g1918 877 PRINTS E-class P450 group I signature 547 565 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g1918 877 PRINTS E-class P450 group I signature 768 792 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g1918 877 SUPERFAMILY Cytochrome P450 397 870 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g1918 877 CDD CYP82 426 870 - -
Glsi08g1918 877 Pfam Cytochrome P450 393 864 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g1918 877 SUPERFAMILY Homeodomain-like 114 171 IPR009057 -
Glsi08g1918 877 Gene3D Cytochrome P450 382 868 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi08g1918 877 PANTHER CYTOCHROME P450 82C3-RELATED 369 876 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1918 Glsi-ChrGlsi08 13569375 13577515 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1918 391 871 Cytochrome P450 AT4G31940 49.593 2.45e-168 497
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi08g1918 p450 1.8e-93 No_clan