Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1874 ATGAATAGCATGGGAGGTTCAGGAAGGGACTTTGGGTCCATGAACATGGATGAGTTGCTAAAGAACATTTGGACAGCTGAAGAGATTCAAACAATGGCGTCCACGAGTGGTGGTAACCAGGGGACGGGTGCTCCCGGTGGTGGGCATTTGCAGAAGCAAGGCTCGCTGACGCTGCCGCGGACACTTAGCCAGAAGACAGTGGATGAGGTTTGGAAGGATATTTCCAGGGATTACGGTGCGGGGAAGGATGGCAGTGCTACGGGTCCTGGAGGTCCCGATTGGCCGCAGAGGCAGCAGACTTTGGGAGAGATGACGTTGGAGGAGTTCTTGGTCAGAGCCGGCGTTGTCAGAGAAGATATGCAATTAGTTGCAAAGCCAAAAGGTGGAGTTTTCGCTGATGTATCTCGTACGGAGAATAATGGTGGCTTAGCAATGGATTTTCAACAGTTCAGTAAGGGTACAGGGTTAATGGGAAGCCGGATTCCTGGGAATAATGATCGTCTGACTCTTCAGCCGTCCACCAATTTGCCGTTGAATGTTAACGGTGTTAGATCGAATCAACAACAACTGCCGAGTTCACAGCCGCCGCAACTGCAGCAGCAGATATTTCCTAAGCAGTCTGCTATGGCTTATGCGACTCAGATACCGTTAACGGGCAACGCTCAGCTAGGCAATCAAGCAATTAGAGGAGGGATTGTGGGACTTACCGATCAGGGTCTGAATGGTAATATGATTCCGGGTTCTACGCTGCAAGCTGGAGGGATGGGTGGTATGAGTTTAGGCCCTGGGGCTGTTCACTTAGCAACAGGATCACCGGCTAATCAGCTTTCGTGCGATGAAGTTGGAAAGAGTAATGGTGATACTTCGTCTATATCGCCAGTTCCTTATGTCTTTAACGGTGGTTTAAGGGGGAGAAAGAGCAATGGAGCTGTGGAGAAGGTAATTGAAAGGAGGCACAGGAGAATGATAAAGAATAGAGAATCAGCTGCTAGGTCGCGGGCTCGCAAGCAGGCTTATACCACGGAACTGGAAGGAGAACTTGCAAAGTTGAAAGAGGAGAACCATGAACTTCAGAGGAAGCAGACAGAAATAATGGAAATTCAGAAGAATCGGGTTATGGAGATGATAAATTTGCAACGAGGAGTCAAGAAAAGATGCTTAAGACGAACACAAACTGGTCCATGGTAG 1188 0.4891 MNSMGGSGRDFGSMNMDELLKNIWTAEEIQTMASTSGGNQGTGAPGGGHLQKQGSLTLPRTLSQKTVDEVWKDISRDYGAGKDGSATGPGGPDWPQRQQTLGEMTLEEFLVRAGVVREDMQLVAKPKGGVFADVSRTENNGGLAMDFQQFSKGTGLMGSRIPGNNDRLTLQPSTNLPLNVNGVRSNQQQLPSSQPPQLQQQIFPKQSAMAYATQIPLTGNAQLGNQAIRGGIVGLTDQGLNGNMIPGSTLQAGGMGGMSLGPGAVHLATGSPANQLSCDEVGKSNGDTSSISPVPYVFNGGLRGRKSNGAVEKVIERRHRRMIKNRESAARSRARKQAYTTELEGELAKLKEENHELQRKQTEIMEIQKNRVMEMINLQRGVKKRCLRRTQTGPW 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1874 395 SUPERFAMILY Leucine zipper domain 317 365 IPR046347 GO:0003700|GO:0006355
Glsi08g1874 395 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 315 366 IPR004827 GO:0003700|GO:0006355
Glsi08g1874 395 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 395 IPR043452 GO:0003700|GO:0045893
Glsi08g1874 395 SMART brlzneu 312 378 IPR004827 GO:0003700|GO:0006355
Glsi08g1874 395 Gene3D - 315 371 - -
Glsi08g1874 395 Coils Coil 340 370 - -
Glsi08g1874 395 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 320 335 IPR004827 GO:0003700|GO:0006355
Glsi08g1874 395 Pfam bZIP transcription factor 317 366 IPR004827 GO:0003700|GO:0006355
Glsi08g1874 395 CDD bZIP_plant_BZIP46 317 369 - -
Glsi08g1874 395 MobiDBLite consensus disorder prediction 34 54 - -
Glsi08g1874 395 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 315 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1874 Glsi-ChrGlsi08 13274669 13278036 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1874 5 395 bZIP Transcription Factor Family AT4G34000 44.056 3.94e-89 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi08g1874 bZIP_1 2e-12 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1874 08 13274669 13278036 Glsi08g1874 08 13274669 13278036 ECH