Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1853 ATGGAAGCAGGGGAAAATTCTTGTGTGAAGGTTGCGGTCCATGTCCGACCACTCATCAGTGATGAGAAGCTTCAAGGGTGTAAAGATTGTGTCACCGTCGTCCCTGGAAAGCCTCAGGTACAAATTGGTGCCCATTCCTTTACATTTGATCATGTTTATGGGAACACTGGTTCTCCTTCATCTGCCATGTTCGAAGAATGTGTTACTCCCCTTGTTGATGGTTTGTTCCAAGGATATAATGCTACTGTTCTTGCATATGGTCAGACAGGTTCCGGGAAAACGTACACCATGGGCACTGGCTTTAAAGATGGTTACCAAACAGGAATAATACCACAAGTTATGAATGTTTTGTTCAACAAAATTGAAACCTTAGAGCGTCAGATAGAATTTCAGTTGCATGTTTCCTTTATTGAGATTCTTAAAGAAGAGGTACGAGACTTGCTGGATCCCACTGGTGTGAGCAAAACAGATAATGCAAATGGACATGCAGGGAAAGTGGCTGTTCCTGGAAAACCACCAATACAAATTCGCGAAACATCAAATGGTGTCATTACCCTAGCAGGATCTACTGAAGTCAGTGTCGCATCGCTAAAAGAAATGGCCACTTTCCTGGAACAAGGATCATTGAGCAGAGCAACTGGGAGCACGAATATGAACAACCAATCCAGTCGATCACATGCCATATTCACCATTACATTAGAGCAAATGCATAAGCTCAACACTGCTATTCCCAGTGAGAACAGTTTAAATGACATCATGAATGAAGAGTATCTTTGTGCCAAGTTGCACTTAGTAGATCTTGCTGGATCTGAACGAGCTAAAAGAACAGGGTCTGATGGTGTGCGTTTTAAGGAAGGAGTTCATATTAACAAAGGTCTTCTGGCACTTGGAAATGTTATTAGCGCCCTTGGTGACGAAAAGAAGCGAAAGGAAGGCGTTCATGTTCCTTATAGGGATAGTAAACTTACTAGGCTTTTGCAGGATTCACTTGGTGGTAACAGCAGAACTGTTATGATAGCCTGCATAAGTCCTGCTGATATTAATGCCGAGGAAACCCTTAACACATTGAAGTATGCAAACCGTGCACGCAATATTCAAAATAAGCCAGTTATCAATAGGGATCCCATGTCCAATGAGATGCTAAAAATGCGACAACAACTGGAGTATTTGCAGGCTGAACTTTGTGCCCGTGCTGGTGGGTCTTCTGAGGAAGTTCAGGTCCTTAAGGAAAGGATTTCTTGGCTTGAAGCTGCCAATGAGGATCTTTGCCGTGAACTTCATGAATGTCGTAGTAGATGCTCTTTTATAGAACAATGTGGCAAGGATGCTCATGATGGTAGCACATGCATTTTGAAGACTGATGGGCTTAATAGGAGCTTGTCTACTATAGCATCTGATTATCCAATGAGTGAAGCAGCAGGTGATTCAAGGGAAGTTGAAGAAGTGGAAAAGGAGTGGGAGCACACACTTCTGCAAAATAGAATGGACAGAGAGTTACTTGAGTTGAATAAACGCTTGGAGGAGAAAGAGTCTGAGATGAAGCTTTTTGGATCATTTGATGCTGACACACTCAAGCAGCACTTTGGAAAGAAAATGATGGAACTGGAGGATGAGAAGAGAACTGTGCAGCAAGAGAGGGATCATCTTTTGGCTGAAGTTGAAAATCTTGCTGCCAATTCTGATGGACAAACACAGAAATTAGAGGATATCCATGCCCAAAGATTGAAAGCACTTGAAGCACAGATTCTAGATCTGAAGAAGAAACAAGAAAGTCAGGTCCAGCTTTTGAAGCAAAAGCAAAAAAGTGATGAAGCTGCAAAGAGACTGCAAGATGAAATACTATCTATAAAGGCCCAAAAGGTTCAATTGCAACAAAGGATCAAACAAGAGGCAGAACAGTTTCGGCAGTGGAAGGCTTGTAGAGAGAAAGAGCTGCTTCAATTACGGAAAGAGGGAAGAAAAAATGAGTATGAAAGACATAAGCTGCAAGCTTTAAATCAGCGCCAGAAAATGGTGCTTCAAAGGAAGACTGAAGAAGCTGCAATGGCCACCAAGAGGTTAAAAGAGTTGTTAGAGGCACGTAAATCTTCCAGCCGAGACACTTTAGTTACTACAAATGGAAGTGGAACAAATGGGCAGAGCAATGAGAAGTCATTACAACGATGGATTGATCATGAGCTAGAAGTCATGTTGAAAGAGCATGAAGTTCGTTTTGAGTATGAGAAGCAAAGCCAAGTGCGAGCTGCTCTTGCAGAGGAGTTAGCCATGCTTAAGCAAGTGAATGATTTTGCTGCGAAGGGCCTCAATCCTCCTAGAGGAACGAATGGATTTGCTAGAGCATCTTCCATGTCACCAAATGCAAGAATGGCCAGAATAGTTTCACTTGAGAACATGCTGAGCATATCATCTAATTCACTTGTAGCAATGGCTTCTCAACTTTCTGAGGCAGAAGAACGAGAACAGGCCTTCACTAATCGTGGACGCTGGAACCAACTGCGCTCGATGGGAGAAGCCAAGAATTTGCTTCAATATATGTTTAATTCAGTTGCAGATGCTAGGTGCCAACTGTGGGAGAAGGACATGGAGATCGGGGAAATGAAAGATCAAATCAAAGAACTTGTAGGTCTATTACGGCAGAGTGAGATGAAAAGAAAAGAAGCTGAGAAAGAGCTGAAACCGAGAGAGCAAGCGCTAGAAACCACATTGGCTACGCCAGCTTCTGGAAACTCGCCAGTTTCATTGAAACACTATGCTGAAGACATGACCGGACCTTTATCTCCAGTGTCTCTGCCAGTACATAAACAGCTCAAATATACCCCAGGCATTGCTAATGGGTTAGTGAGGGAATCAGTAGCACTTACAGATCAGAGTAGAAAGATGGTACCCATCGGGCAGCTGTCAATGAAAAAACTAGCAATTGTAGGACAAGCTTCTGGCAAGCTATGGAGGTGGAAAAGAAGTCATCACCAGTGGCTACTACAATTCAAATGGAAGTGGCAGAAGCCATGGAAACTTTCAGAATGGATTCGACACAGTGATGAGACAATCATGAGAGCAAGGCCACGACCACAGGCTTTGCCACATATCACGTGA 3093 0.4306 MEAGENSCVKVAVHVRPLISDEKLQGCKDCVTVVPGKPQVQIGAHSFTFDHVYGNTGSPSSAMFEECVTPLVDGLFQGYNATVLAYGQTGSGKTYTMGTGFKDGYQTGIIPQVMNVLFNKIETLERQIEFQLHVSFIEILKEEVRDLLDPTGVSKTDNANGHAGKVAVPGKPPIQIRETSNGVITLAGSTEVSVASLKEMATFLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMHKLNTAIPSENSLNDIMNEEYLCAKLHLVDLAGSERAKRTGSDGVRFKEGVHINKGLLALGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSRTVMIACISPADINAEETLNTLKYANRARNIQNKPVINRDPMSNEMLKMRQQLEYLQAELCARAGGSSEEVQVLKERISWLEAANEDLCRELHECRSRCSFIEQCGKDAHDGSTCILKTDGLNRSLSTIASDYPMSEAAGDSREVEEVEKEWEHTLLQNRMDRELLELNKRLEEKESEMKLFGSFDADTLKQHFGKKMMELEDEKRTVQQERDHLLAEVENLAANSDGQTQKLEDIHAQRLKALEAQILDLKKKQESQVQLLKQKQKSDEAAKRLQDEILSIKAQKVQLQQRIKQEAEQFRQWKACREKELLQLRKEGRKNEYERHKLQALNQRQKMVLQRKTEEAAMATKRLKELLEARKSSSRDTLVTTNGSGTNGQSNEKSLQRWIDHELEVMLKEHEVRFEYEKQSQVRAALAEELAMLKQVNDFAAKGLNPPRGTNGFARASSMSPNARMARIVSLENMLSISSNSLVAMASQLSEAEEREQAFTNRGRWNQLRSMGEAKNLLQYMFNSVADARCQLWEKDMEIGEMKDQIKELVGLLRQSEMKRKEAEKELKPREQALETTLATPASGNSPVSLKHYAEDMTGPLSPVSLPVHKQLKYTPGIANGLVRESVALTDQSRKMVPIGQLSMKKLAIVGQASGKLWRWKRSHHQWLLQFKWKWQKPWKLSEWIRHSDETIMRARPRPQALPHIT 1030
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1853 1030 SMART kinesin_4 6 373 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi08g1853 1030 Gene3D Kinesin motor domain 1 393 IPR036961 -
Glsi08g1853 1030 Pfam Kinesin motor domain 16 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi08g1853 1030 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 1 1020 IPR027640 GO:0003777|GO:0007018
Glsi08g1853 1030 Coils Coil 673 693 - -
Glsi08g1853 1030 ProSiteProfiles Kinesin motor domain profile. 8 365 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi08g1853 1030 CDD KISc_KIF4 7 366 - -
Glsi08g1853 1030 MobiDBLite consensus disorder prediction 697 717 - -
Glsi08g1853 1030 MobiDBLite consensus disorder prediction 694 717 - -
Glsi08g1853 1030 FunFam kinesin-like protein KIN-4A isoform X1 2 393 - -
Glsi08g1853 1030 Coils Coil 405 425 - -
Glsi08g1853 1030 Coils Coil 525 559 - -
Glsi08g1853 1030 ProSitePatterns Kinesin motor domain signature. 260 271 IPR019821 GO:0003777|GO:0005524|GO:0007018
Glsi08g1853 1030 Coils Coil 568 633 - -
Glsi08g1853 1030 Coils Coil 492 512 - -
Glsi08g1853 1030 Coils Coil 870 890 - -
Glsi08g1853 1030 PRINTS Kinesin heavy chain signature 216 233 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi08g1853 1030 PRINTS Kinesin heavy chain signature 315 336 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi08g1853 1030 PRINTS Kinesin heavy chain signature 261 279 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi08g1853 1030 PRINTS Kinesin heavy chain signature 78 99 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi08g1853 1030 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 395 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1853 Glsi-ChrGlsi08 13111942 13123403 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1853 9 389 Calmodulin-binding Proteins AT5G65930 33.075 1.55e-53 202