Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1850 ATGCTTTCCGCTAAGCCCACAGAAGCGCTGATTGGTTGGTCGACTTTGGGTGTTTGCAGGAACCCACGTTATCCTGAAGAAAGGAAGGAGGTGCTGCTTGTTGAGGATTGTGACAATCCTATTTACGTGGGATGTCTCCGATTGTTCTTGTCTAAGCTGGGCTCCTCATTGTCAAATCTATGTGGTAGATCTCAGGATTCTGGTTTTCGGAGGTTTGAGTTGTCCATGGATGATGTAGCAAAGGATACTTCCACTGCTCATAAAATCCCTACGTCCTCCTCTCACTGTTTCTGTACGTCTAAACCAACACTGTCATTAGCCAATGGACTGCCCTTGCTTAACTGCCTTTTGCAGCATACTCTGAGAAGCCTATGCTCACCTTCCGATTCCCCCACTTCTTCTAAGTGGGTATACGCTGTCTTTTGGAGGATATTGCCCCGGAACTATCCTCCACCCAGGTGGGAATTTGGAGGGACTGCTCTTGATCGCTCCAAGGGAAATAAAAGAAACTGGATCCTCGTTTGGGAAGATGGGTTCTGTGATTTTAGAGAATGCGAACGAGCGAGGAGTGGGTACTTCAACGGGAGATTCGGAGCTCACGTATTCTTCAAAATGTCTCATGAGGTCTACAATTATGGGGAGGGATTACTGGGGAAAGTGGCCATAGATAACAGTCACAAATGGGTGTATAGAGATACCCCAAATGACCCTGAACCTCGCTACATCGCTTCATGGAATGTTTCTATTGAGCCTCGACCAAGGGCGTGGGAATATCAGTTCAATTCAGGAATTCAGACCATCGTCGCCATTGCTGTGAGAGAAGGCATAGTTCAACTGGGTTCGTTTAACAAGATTGCAGAAGACCTCAATCTAGTGATCAGCATACAAAGAAAATTCAGCTACCTCCAGAGTGTACCAGGTGTCTTCGCAATTCAAAGACCATATCTACCCATCCAACATCCTTACATACTCAAACCTAATATCCAGATGATTGAAAGCAATGAAACGACTCATTCTGTCTACAATATAAGTCCGGGAACTGGAGTGAAAAGGCTATTTGACGAAACATCCAACTATGCTTCGATGAAATCTATTAACTTGGGCTGGAATTCTCCACAGAATGGCACAGCAGGGGCAGGGCCACCTCTTTGGTCAGCTCCTCCTGCCTTGCCCGCCATGTCTATAGTTCCAACCTATAATCCCATTCAAGTTACTGATACAAATATCACGGGCCAGAGAGTGAAGGTTGATGAATGGGGATTTCATAGTGCTGATGATGGTGATCACAGCGGGATCACGATTTGGGTCGATAAGAGAGTGTCAGAGTGA 1329 0.4605 MLSAKPTEALIGWSTLGVCRNPRYPEERKEVLLVEDCDNPIYVGCLRLFLSKLGSSLSNLCGRSQDSGFRRFELSMDDVAKDTSTAHKIPTSSSHCFCTSKPTLSLANGLPLLNCLLQHTLRSLCSPSDSPTSSKWVYAVFWRILPRNYPPPRWEFGGTALDRSKGNKRNWILVWEDGFCDFRECERARSGYFNGRFGAHVFFKMSHEVYNYGEGLLGKVAIDNSHKWVYRDTPNDPEPRYIASWNVSIEPRPRAWEYQFNSGIQTIVAIAVREGIVQLGSFNKIAEDLNLVISIQRKFSYLQSVPGVFAIQRPYLPIQHPYILKPNIQMIESNETTHSVYNISPGTGVKRLFDETSNYASMKSINLGWNSPQNGTAGAGPPLWSAPPALPAMSIVPTYNPIQVTDTNITGQRVKVDEWGFHSADDGDHSGITIWVDKRVSE 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1850 442 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 109 394 - -
Glsi08g1850 442 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 117 299 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1850 Glsi-ChrGlsi08 13087782 13091569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1850 118 303 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 31.250 1.10e-16 80.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1850 08 13087782 13091569 Glsi08g1850 08 13087782 13091569 ECH