LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi08g1839	ATGGAATGGGCACTCTCACTTCTTCTGAACCATCCAGAAGCAATGCAAAAGGTTAGGGCTGAGATAGAAAGTAATGTGGGGGAAAATCGGGCGGTGAATGAATCAGACCTATCCCAACTCAAAGGATTTGCAAAATACGGGCTTGTCCTGGCAAAACGAATAATGGGACTTGCACTGGGTTCCTTGATTCAGACGTTTGAGTGGGAGAGAATTGGCCATGAACAACTCAACATGATGGAGGGAACGGGGGTTACAATGCCTAAACTAGAGCCCTTGGTTGCAATATGCAAAACACGTCAATTTCCCAGGCCGCTCTTGCATTTTGCCTCTCTGAACAAAATTCCATTTCCTCTAATCAAAATGACTGACCCGGAAATCCCAGCCGCACCACCCGCATCGGAGCAAGACTCGACTCCACCCCCCATGGAGGCTCAGCCCCAGCACAACCAACACCAACCAGGTACCAAACTCGACAAACCCGGCGGCATCTCCTTCAGCATATGGCCTCCCACTCAGCGCACCCGGGATGCCGTCATCAATCGCTTAATTGAGACCCTCTCTACGCCCTCCGTCCTCTCCAAGCGCTACGGAACAATGGATTCCGATGAGGCTTCTGCGGTCGCCCGCCAAATCGAGGAAAAGGCTTTCGCAGCCGCTGGCGCCTCTGCTGCCGCCGAGGATGATGGCATCGAGATCCTCCAGGTCTACTCCAAGGAGATCAGCAAGCGGATGCTCGACACTGTTAAGGCCAGAGCTAGTTCAGCCACTCCTGTCGATAATAGTGCGATTCAGACCCCTACCTCCGACGTGCCTCCTTCCGCAGCTACTGAGGCGGCCTCCGTCGATGACTCCGAGTCTTGA	861	0.5354	MEWALSLLLNHPEAMQKVRAEIESNVGENRAVNESDLSQLKGFAKYGLVLAKRIMGLALGSLIQTFEWERIGHEQLNMMEGTGVTMPKLEPLVAICKTRQFPRPLLHFASLNKIPFPLIKMTDPEIPAAPPASEQDSTPPPMEAQPQHNQHQPGTKLDKPGGISFSIWPPTQRTRDAVINRLIETLSTPSVLSKRYGTMDSDEASAVARQIEEKAFAAAGASAAAEDDGIEILQVYSKEISKRMLDTVKARASSATPVDNSAIQTPTSDVPPSAATEAASVDDSES	286

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi08g1839	286	Pfam	Cytochrome P450	1	41	IPR001128	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Glsi08g1839	286	MobiDBLite	consensus disorder prediction	138	154	-	-
	Glsi08g1839	286	SUPERFAMILY	Cytochrome P450	1	99	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037
	Glsi08g1839	286	MobiDBLite	consensus disorder prediction	253	274	-	-
	Glsi08g1839	286	MobiDBLite	consensus disorder prediction	123	169	-	-
	Glsi08g1839	286	Gene3D	WPP domain	164	258	IPR038214	-
	Glsi08g1839	286	Pfam	WPP domain	164	255	IPR025265	-
	Glsi08g1839	286	PANTHER	WPP DOMAIN-CONTAINING PROTEIN 1-RELATED	131	279	IPR044692	GO:0000278\|GO:0048527
	Glsi08g1839	286	MobiDBLite	consensus disorder prediction	251	286	-	-
	Glsi08g1839	286	Gene3D	Cytochrome P450	1	42	IPR036396	GO:0004497\|GO:0005506\|GO:0016705\|GO:0020037

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi08g1839	Glsi-ChrGlsi08	13018339	13022030	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi08g1839	1	40	Cytochrome P450	AT5G36220	55.000	4.48e-08	51.6

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Glsi08g1839	08	13018339	13022030	Glsi08g1839	08	13018339	13022030	ECH