Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1837 ATGGCAGACCAAGAGAACCGCGTGAGGCTCACCCGTGCGGCCAAGAAGAGGGCCGCTACTGCTATTGCCGAACTGCACACCGCCACCAAGAAGCGTGTGGTGCTGGGGGAGCTCTCCAACTTGTCAAATGTCGTCGTACCGGAGAAACCAAGGGAGAAAAGTAGTAAAATCAAGCGAAAAGTCAGAAAAGTTTTACCCGCGACGACAACGACACCGCCGGAACCCAATGATACAGATGAAAAGTTGGATGATCCCCAAATGGGTGGGCCTTATGTTTCTGATATTTACGAGTATCTTCGAAATATGGAGGTGGATCCCAGAAGAAGACCGTTACCTGATTACATAAAGAAAGTTCAGAAAGATGTTAATGCTAATATGAGGGGTGTTCTGGTAGATTGGTTGGTGGAGGTTTCTGAGGAATACAAGCTTGTTTCAGACACTCTTTTTCTTTCTGTTTCTTATATCGATAGGTTTCTATCCGTAAATTCTCTAAGTAGGCAGAGACTGCAGTTATTGGGTGTTTCTTCAATGCTAATTGCCTCAAAGTACGAGGAGATTAAGCCTCCTGAAGTGGAAGATTTTTGTTACATTACGGACAACTCATACACAAAGGAAGAGGTAGTGAAGATGGAGGCTGAAATACTGAAGTCACTGAGGTTTGAATTGGGTTACCCCACTACTTCTGAGCTTCAGTTTGAGTTCCTTAGCTACTACCTTGCGGAGCTCAGTTTGTTGGATTATAGTTGTGTAAAGTTCTTGCCTTCTTTGGTGGCCGCATCTGTTATATTTCTAGCCAGATTTATGCTAAGCCCAAAGATCCATCCTTGGAATTCCGGGCTCCATCAACACTCTGGGTATAAACCAGCTGATTTGAAGGAATGTGTTCTAGCCATACATGACTTGTATCTTAGTAGGAGAGGTGGGTCTCTGCAAGCTGTAAGAGAGAGATACAAGCAGCATAAGTTCAAATCTGTTGCAACAACGCCTTCTCCTCCGGAGATACCCCTTTCGTTGGCTGTTTCAACTTATATACCTCCTTGGGTGCTTGTGGCATTTATGGTTTCTTTCAAGTTTTCATTTCCCATAGCATCGGGGAAAAGAAGAGAGCAAGTCAGGGAAAGGACTTTTGTTCGTCTTATGGACTTGGCTCGATATATTGGACCGCTTGAACTTAATATACTTAAGCTAATACCAGACAAGTTCTTGCAGCTTTTCCATGAATTGGCAATTCAACAATGTAGCCATGGGGATCAATTCTTTGAGCTAGAAGCAATCTCAGTTTATCAGAAGCATCAACAGGTGCTTAGGACAGATGAATGA 1320 0.4371 MADQENRVRLTRAAKKRAATAIAELHTATKKRVVLGELSNLSNVVVPEKPREKSSKIKRKVRKVLPATTTTPPEPNDTDEKLDDPQMGGPYVSDIYEYLRNMEVDPRRRPLPDYIKKVQKDVNANMRGVLVDWLVEVSEEYKLVSDTLFLSVSYIDRFLSVNSLSRQRLQLLGVSSMLIASKYEEIKPPEVEDFCYITDNSYTKEEVVKMEAEILKSLRFELGYPTTSELQFEFLSYYLAELSLLDYSCVKFLPSLVAASVIFLARFMLSPKIHPWNSGLHQHSGYKPADLKECVLAIHDLYLSRRGGSLQAVRERYKQHKFKSVATTPSPPEIPLSLAVSTYIPPWVLVAFMVSFKFSFPIASGKRREQVRERTFVRLMDLARYIGPLELNILKLIPDKFLQLFHELAIQQCSHGDQFFELEAISVYQKHQQVLRTDE 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1837 439 SUPERFAMILY Cyclin-like 228 334 IPR036915 -
Glsi08g1837 439 FunFam Cyclin A1 208 327 - -
Glsi08g1837 439 Gene3D - 94 327 - -
Glsi08g1837 439 Gene3D - 110 223 - -
Glsi08g1837 439 MobiDBLite consensus disorder prediction 47 86 - -
Glsi08g1837 439 SUPERFAMILY Cyclin-like 83 222 IPR036915 -
Glsi08g1837 439 ProSitePatterns Cyclins signature. 127 158 IPR006671 -
Glsi08g1837 439 SMART Cyclin_C_2 149 331 IPR004367 -
Glsi08g1837 439 FunFam Mitotic cyclin 6 110 207 - -
Glsi08g1837 439 SMART cyclin_7 132 216 IPR013763 -
Glsi08g1837 439 SMART cyclin_7 217 300 IPR013763 -
Glsi08g1837 439 Pfam Cyclin, C-terminal domain 229 330 IPR004367 -
Glsi08g1837 439 PANTHER CYCLINS 76 319 IPR039361 -
Glsi08g1837 439 Pfam Cyclin, N-terminal domain 94 222 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1837 Glsi-ChrGlsi08 13005373 13008391 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1837 1 338 Core Cell Cycle Gene Families AT5G43080 60.340 1.01e-146 420