Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1824 ATGAGCTGCAACGGTTGTCGAGTCCTCCGAAAGGGGTGCAGCGAAGAGTGCGCTCTGAGGTCGTGCTTGCAGTGGATCGATTCCCCTGAAGCACAAGCCCACGCCACTCTCTTCCTTGCTAAATTCTTCGGCCGTAGCGACTTAATGTCCTTCATTTCCTCTGTTCCCCCAACCAAGAGACCAGCCTTGTTTCAGTCTCTGCTATATGAAGCGTGCGGGCGAACCGTGAATCCCGTGAACGGTGCCGTAGGACTTCTGTGGTGTGGTAACTGGCAAGTATGCCAGGCGGCCGTCGAGACGATACTCGCCGGAGGTGTTCTGAAGCCGATCTTGGATGAGTCTTCTGCCACCATCTATAAGAATGCCTGTAACATTGGGAGAAGTGTCATGCACGATCTGAGAGAGATGAATCAGAAGTCGGCCTTGGATCTCTCGCTGGTTCCCGAGGATGCAAAACCCGGGAGGAGGCAGAGTGATCCGGGTATGTCGTTGATTTTGGGAGAATCGGAGAGGAGGAGCTGTGGCAGTTGCGAATACGAGAAGAAAAAGCTTTTAAATCTGTTCGTGTAA 570 0.5281 MSCNGCRVLRKGCSEECALRSCLQWIDSPEAQAHATLFLAKFFGRSDLMSFISSVPPTKRPALFQSLLYEACGRTVNPVNGAVGLLWCGNWQVCQAAVETILAGGVLKPILDESSATIYKNACNIGRSVMHDLREMNQKSALDLSLVPEDAKPGRRQSDPGMSLILGESERRSCGSCEYEKKKLLNLFV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1824 189 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 140 - -
Glsi08g1824 189 Pfam Lateral organ boundaries (LOB) domain 2 100 IPR004883 -
Glsi08g1824 189 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1824 Glsi-ChrGlsi08 12924402 12925085 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1824 1 110 AS2 family AT3G49940 81.818 7.37e-64 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi08g1824 LOB 7.6e-26 No_clan