Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1821 ATGCTTTTGCTTTGCGACGAGAATAAAGAGCTTATAACTTCATTCGGGGCAATTAAGGCACTGGTTGGAGCCCTCAAGACGGGAACTTCAACGGCTAAAGCAAACGCGGCATGTGCTTTGTTACGTCTATCGCAAACAGAGGAGAACAAGATCGCAATAGGAAGGTCAGGAGCCATTCCCTTGCTAGCGAATCTTCTGGAGAACAGGGGTTTCCGTGGGATCAAAGACGCATCGACTACGCTATATTCACTGTGTTGGGTGGAGGAGAACAAGATGAGAGCAGTGGAAGTAGGAATAATGAAGGGGATAGTGGAATCGATGGCAGATTTTGGATCAAACATGATTTGTGAGAACAACATGGCTTATCGTACTATGGTTGCTCGCGAAGGAGCCATTCCTCCCATTAGTCGCATTGTCCAAGTCCGGCACCAATCGCGCCAAACAAAAGGTCGAGACAATACTAGAGCTTCTACGGCAACTAAGATCCAGAGACGGCGCGTCGGCATAAATCTCCCACTACCTCATCGTGTCCTGCCCAGGCTTGTGATTGACTTAGAAACACTCTCCCTTGCTACTCGAGCCCAGCCCACTTGTAAATATCTTTGTCACGGATAA 615 0.4813 MLLLCDENKELITSFGAIKALVGALKTGTSTAKANAACALLRLSQTEENKIAIGRSGAIPLLANLLENRGFRGIKDASTTLYSLCWVEENKMRAVEVGIMKGIVESMADFGSNMICENNMAYRTMVAREGAIPPISRIVQVRHQSRQTKGRDNTRASTATKIQRRRVGINLPLPHRVLPRLVIDLETLSLATRAQPTCKYLCHG 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1821 204 Pfam Armadillo/beta-catenin-like repeat 47 85 IPR000225 GO:0005515
Glsi08g1821 204 Gene3D - 1 160 IPR011989 -
Glsi08g1821 204 SUPERFAMILY ARM repeat 5 132 IPR016024 -
Glsi08g1821 204 SMART arm_5 46 86 IPR000225 GO:0005515
Glsi08g1821 204 SMART arm_5 5 45 IPR000225 GO:0005515
Glsi08g1821 204 PANTHER U BOX DOMAIN-CONTAINING 4 108 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1821 2 156 U-box Gene Family AT1G23030 38.182 5.23e-26 102