Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1819 ATGGATGATAATGTTTCCAACCTTCTTTGCGAAGAAAATGAAACATGCTTGGAAGAAGAGGTGGTAGATGAAGATTCATTCATTCACTCAGAGGATGAGTATGTGGACATTTTGGTCGAGAGAGAGAGCGCTCTCTGGTTCAAAAGGGACGAATCTTTGGAGTTTGCGAACTGGATCAAACTTGCCCGCTTCGATGCCATCAACTGGATTCTCAAAACAAGAGCAACATTCGGTTTTCGCTTTCAAACGGCTTATCTGTGTGTTACGTACTTGGATCGATTCCTTTCGAGGCGGTGTATTGATAGTGAAATGTATTGGGCAATCCGGTTACTATCTGTTGCGTGCCTTTCTCTAGCTGCGAAGATGGAGGAGTGCAACGTGCCGGCGCTTCCAGAGTTTCAATCACCAGACTACAGCTTTGAGAGTAAAGTAATTCAGAGAACGGAGCTTTTGGTGCTGACCACATTGGAATGGAATATGGGTTTTGTCACTCCCTTTGCTTTTCTTCCTTATTTCATTAACAAGTTCTGCAACAGATCCCCACCAAGTAATATGTCGTCCACCACTACGCAACTCATCTTCACCACAATGAAAGAGGTCAATTTAATGGATCATAGACCATCTGTCATTGCAGCTGCAGCTACAATGGTGGCATTGGATCAGCAATTAACAAGAGAAGCAGTACAGTTGAAGATGAGCTCACTGTCTCAATATAGGATTCTTGAAACTGAAGAGATATCTACATGCTATAATCTAATCCAAAGATTACACACAGAGAAAACCAAAAGAGAAAAAGCTATGCATTCCCCGTTTCCTTCGGCTATCCGATCGAGGCCAATTCACATGCTAGAGAGTTCTTTAGTTACTTCTGCTGCTACGACCAAGAGAAGAAGACTTGCGTTCAACAACCATAGAGAAAGTCGAGGCAAAAATGACAGGAAGCCACAGAAAGGAGGAAACAAGAATAAAAATCAGAGGCATGGAGTACATACAAAAGTTGAATTGCGGGAGTCACCAGGTGGACAGGTTGAAAGGGGACGAGGGAACTCTGTTGTTGGTGTGAGTGTTGCATTGTGGCCATCAGAGAAGTGTTATAAAGGAGGGCAATGCATCATGCTTACTCAACGCCACCATTTCCCTCGCCAATAG 1149 0.436 MDDNVSNLLCEENETCLEEEVVDEDSFIHSEDEYVDILVERESALWFKRDESLEFANWIKLARFDAINWILKTRATFGFRFQTAYLCVTYLDRFLSRRCIDSEMYWAIRLLSVACLSLAAKMEECNVPALPEFQSPDYSFESKVIQRTELLVLTTLEWNMGFVTPFAFLPYFINKFCNRSPPSNMSSTTTQLIFTTMKEVNLMDHRPSVIAAAATMVALDQQLTREAVQLKMSSLSQYRILETEEISTCYNLIQRLHTEKTKREKAMHSPFPSAIRSRPIHMLESSLVTSAATTKRRRLAFNNHRESRGKNDRKPQKGGNKNKNQRHGVHTKVELRESPGGQVERGRGNSVVGVSVALWPSEKCYKGGQCIMLTQRHHFPRQ 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1819 382 MobiDBLite consensus disorder prediction 327 341 - -
Glsi08g1819 382 SUPERFAMILY Cyclin-like 147 269 IPR036915 -
Glsi08g1819 382 MobiDBLite consensus disorder prediction 294 347 - -
Glsi08g1819 382 SMART Cyclin_C_2 163 291 IPR004367 -
Glsi08g1819 382 CDD CYCLIN_AtCycD-like_rpt2 163 253 - -
Glsi08g1819 382 CDD CYCLIN_AtCycD-like_rpt1 62 158 - -
Glsi08g1819 382 ProSitePatterns Cyclins signature. 63 94 IPR006671 -
Glsi08g1819 382 SMART cyclin_7 68 154 IPR013763 -
Glsi08g1819 382 Pfam Cyclin, C-terminal domain 163 271 IPR004367 -
Glsi08g1819 382 PANTHER CYCLINS 32 260 IPR039361 -
Glsi08g1819 382 Gene3D - 62 161 - -
Glsi08g1819 382 Gene3D - 162 251 - -
Glsi08g1819 382 FunFam Cyclin-D5-1 58 161 - -
Glsi08g1819 382 Pfam Cyclin, N-terminal domain 63 160 IPR006671 -
Glsi08g1819 382 SUPERFAMILY Cyclin-like 28 160 IPR036915 -
Glsi08g1819 382 MobiDBLite consensus disorder prediction 304 319 - -
Glsi08g1819 382 FunFam Cyclin-D5-1 162 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1819 Glsi-ChrGlsi08 12878913 12884351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1819 3 238 Core Cell Cycle Gene Families AT4G37630 38.168 1.47e-41 145