Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1810 ATGGCACCCAATAACCAAGATCTAACGCTGGTTAATCTTGAGTCAGCATGCTCCGATTTGAAAGCTTTCCTTCTGGCTTCAAAGAAAATGGAAGATAGCCTGGGAAACACCGAGGCAAGGTTTGATCTTATAGAGGGAACTCTGTCTAAAGCATCTAGAAGTGTGGGCCCTTTACAGTCTTTGGCCATGTACACGAAAGCCCTTGATACTAGAATTAACAGAGCTGTTTCTCCTGCTCTTGGACTTCTCGACACCTTCAAGCTCTATGAGTCTCTCCAACAAAAGCTACTCGATCTTTCATCGAAACTATCAGCGGAGAAGACACCGCAAAAACGTCTCGATAACCTACACGATTACATGGATTGCGTTGATCAGCTAAATGAGGCCATTAATTCCATCAGTCAAGAGGGTGAGCCTGTGATTCAGAGGCTCCAAGAGGTGGTCGAGTTCATAAGCAGAACAAAGGCAGCAGATCAATATAGGACACAAAGGTTAAGAGAGACCCTAATCACTCTCAAGGCACTCTATGAAACCGAGGTCGATGCCATGAGGTTTGAAGGTTTACTTGACGAGGCGCTGCTCCATATGCAAGATGAGTTTGAAGGTATATTACAGCAAATAAGGCATCAGAGCGTCGGAGATCTATCACAGCAGCAGCCTGATTATGACGCTGACGATGTCGCCGTTGACTTTGACTTGGGCTCAGAGCTGGAAATTGAAGTACTGAGACGAATTTCAGAGGCTCTCGCTGCCAATGATTGCTTGGATATATGCATTGACATCTACGTCAAGGTGAGATATAGAAGGGCTGCCAAAGCATTAATGAGGCTAAACCCAGATTACTTGAGAACATATACCCCAGAAGGAATCGATGAAATGGAGTGGGAAAGCTTAGAAACAGCGATAACCCTTTGGATCCAACACTTAGAAGTTGCTGTTAAAAAAGTTCTTCTTTCGGAAAAGAAACTTTGCGACGGAGTTATGGGTAAAATCATGGATGGACTCGTCTGGCCGGAATGCTTCGTCAAAATATCTGACAAAATAATGGCCGTGTTCTTTCGATTTGGAGAAGGCGTTGCCAGAAGCAGCAAAGAGCCGCAGAAATTGTTCAAGCTGTTGGATATGTTTGAATCCTTAGAAAAACTCAAACCCGAATTCTTGGAAATTTTCGACGACGAAGCTGCAGTGGATATCTGCGCGCGGTTCCGAGAGCTCGAAAAGCTTCTAATCAATGCTTCAAGCAAAGTATTTTGGGAATTTGGCCTGCAAATAGAAGGGAGCGCAGATGGTTTTCCACCCCCACAAGATGGCTCAGTACCGAAACTGGTAAGATATGCCATTAATTACCTCAAGTACCTTGCAACCAAGAATTACAGAGCAGCCATGGCTAAGGTTCTCCAGACAGAGCAGATATGGAAAGTTGGGATATTATCGAAACCCGAGACAGACGAGACTTTACTGAAGGATGCCATTTCCAACATTATGGATGCCCTTCAAAGAAACATCGAGTCTAAAAGCTCCCGTTCCAGAGACAAAACTTTGGTTCATATATTCGCAATGAATACATATTGGTACATCTACATGAGGACAAAAAACACGGAGCTTGGTGAGTTATTGGGTGAGCAATATATGAAAAACAACTACAAGGCAATGGCAGAGGAATCAGCCTACGTGTATCAGATGCAAGCATGGGGAGTTTTGCTGAGGATTTTGGATATTGAGGAACCAAAGAAACAGGGGAAAGACACCATTGGAGATTTAGTGACTAAAAAAATTGAAACTTTTTTGAAGTGTTTGGATGAGATTTGTCAGAAGCACAGAGGGTATTATAGTATACCAGATAATGATTTAAGGGAACAGATAAGAGAAGTGACCGCGAAGCTTGTGGTGGCGGCATACACAGAGTTCCTGGAGTCCTACTCAGGATTGTTCCATAAAAAACTTTACCCGAGTCCTGAAAGTTTGCAAGGGTTGGTGGGTCAGGCTTTTGATAGCGGTGATATGAAGTTGAAGCGGCGGAGTTCCAACGATCGGATGGTTGGCCGTACCACTGCGTCTCTGGAGGGAGAGATCAGGGATTTCCGACGCTCCAGATCAGAGACTAGCGATGTTTGA 2115 0.4426 MAPNNQDLTLVNLESACSDLKAFLLASKKMEDSLGNTEARFDLIEGTLSKASRSVGPLQSLAMYTKALDTRINRAVSPALGLLDTFKLYESLQQKLLDLSSKLSAEKTPQKRLDNLHDYMDCVDQLNEAINSISQEGEPVIQRLQEVVEFISRTKAADQYRTQRLRETLITLKALYETEVDAMRFEGLLDEALLHMQDEFEGILQQIRHQSVGDLSQQQPDYDADDVAVDFDLGSELEIEVLRRISEALAANDCLDICIDIYVKVRYRRAAKALMRLNPDYLRTYTPEGIDEMEWESLETAITLWIQHLEVAVKKVLLSEKKLCDGVMGKIMDGLVWPECFVKISDKIMAVFFRFGEGVARSSKEPQKLFKLLDMFESLEKLKPEFLEIFDDEAAVDICARFRELEKLLINASSKVFWEFGLQIEGSADGFPPPQDGSVPKLVRYAINYLKYLATKNYRAAMAKVLQTEQIWKVGILSKPETDETLLKDAISNIMDALQRNIESKSSRSRDKTLVHIFAMNTYWYIYMRTKNTELGELLGEQYMKNNYKAMAEESAYVYQMQAWGVLLRILDIEEPKKQGKDTIGDLVTKKIETFLKCLDEICQKHRGYYSIPDNDLREQIREVTAKLVVAAYTEFLESYSGLFHKKLYPSPESLQGLVGQAFDSGDMKLKRRSSNDRMVGRTTASLEGEIRDFRRSRSETSDV 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1810 704 Pfam Exo70 exocyst complex subunit 305 644 IPR046364 GO:0000145|GO:0005546|GO:0006887
Glsi08g1810 704 PANTHER EXOCYST COMPLEX PROTEIN EXO70 111 658 IPR004140 GO:0000145|GO:0006887
Glsi08g1810 704 SUPERFAMILY Cullin repeat-like 112 663 IPR016159 -
Glsi08g1810 704 Gene3D Exocyst complex component Exo70 155 673 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1810 Glsi-ChrGlsi08 12838325 12840520 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1810 7 646 EXO70 exocyst subunit family AT4G31540 31.202 2.26e-82 273