Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1802 ATGGGTAGAGCAAGAAGCTCTGGTGATCAGAGAAAATCTAAAACATTACAAATGGCAAGGATTTCTAGTTACTTGCATGAGATTTTACTTCTCCTTCTCCCAGCTTTCCTGTTGCAGACTTCCTCTCAACTAGCAACGTCTCGCTCAATAGTAGAGTTCCTTCCTGGGTTCGAGGGACCACTTCCTTTTGTACTCGAAACAGGGTACGTGGGAGTCGGTGAAACAGATGATGTACAGATTTTTTACTACTTTATAGAGTCAGAGACCAATCCCAAGGAGGACCCTCTCGTGCTTTGGCTAACCGGCGGTCCTGGTTGCTCTGCACTTTCGGGCCTTGTGTTTGAAATAGGTCCACTTGCATTTAAAAACGAGGAATATAACGGGAGCCTGCCTAATTTGGTGTTGAGGCCCAACTCATGGACGAAGGTAAGTAGCATTATATTCGTAGATTTGCCTGCTGGCACGGGCTTCTCTTATACCACAACAAAACTTGTTGCTCAGCAAAGCGACTGGAAAATAGTTCATCAAGCCCATCAATTTCTTAGGAAGTGGCTGATTGATCATCCGGAATTTCTCTCAAATAAAGTGTATGTTGGTGGCGACTCATACTCCGGCATTCCTGTCCCAGCAATTGTCGAAGAAATTTCAAATGGGAATGAAGCTGGTGTCCAACCATGGATAAATCTTCAGGGATACCTGCTGGGGAATGCATTGACAATTCCATCCAAAGGAAATTATGCAATCCCATTTGCTCATGGAATGGGACTAATTTCTGATGAACTCTATCAGTCGCTGCAAGAAAATTGTGGAGGAGACTACGTAAATATAGATCCAAGAAATTTACTTTGTTTGATAGATATGCAGTCCTTTTATAAGTCTACATACGGACTTAATACAGCTCAAATTTTGGAACCCCTATGTGAGTTTGCTTTGCCAAAGCCAATGGAAATTTCCTGGAGAAGATCCCTAACTTATAAGCCCAGGATACTTGTCAAATCTCATCTCACATTGCCGCCCTTAAGTTGTCGGACTCATGCTTATTTCCTGTGTGGTTACTGGGCCAACGATGATAAAGTTCGCAGGGCACTGCATATTCGAAAGGGAAGTATAGAGAAATGGCAGCGTTGTAACTATGGGTTGAAATACAAGAAAGACATCTCTGAAAGCTTGCAGTATCATATAAATCTGAGTAGAAAAGGGTATCGTTCATTGATATACAGCGGGGACCATGACATGCTTGTTCCTTTCTTGGACACACAAGCGTGGATAAGATCTCTAAATTACTCCATCCTGGATGACTGGAGGCAGTGGTATACAAATGCCCAAGTTGCGGGATACACGAGGACTTACTCCAATCACATGACATTTGCAACTGTGAAGGGCGGAGGACACACAGCTCCCGAGTACAGACCTGAAGAATGTTTTGCCATGTTTAGTCGATGGATATCTAATCAACCCTTGTAG 1464 0.4331 MGRARSSGDQRKSKTLQMARISSYLHEILLLLLPAFLLQTSSQLATSRSIVEFLPGFEGPLPFVLETGYVGVGETDDVQIFYYFIESETNPKEDPLVLWLTGGPGCSALSGLVFEIGPLAFKNEEYNGSLPNLVLRPNSWTKVSSIIFVDLPAGTGFSYTTTKLVAQQSDWKIVHQAHQFLRKWLIDHPEFLSNKVYVGGDSYSGIPVPAIVEEISNGNEAGVQPWINLQGYLLGNALTIPSKGNYAIPFAHGMGLISDELYQSLQENCGGDYVNIDPRNLLCLIDMQSFYKSTYGLNTAQILEPLCEFALPKPMEISWRRSLTYKPRILVKSHLTLPPLSCRTHAYFLCGYWANDDKVRRALHIRKGSIEKWQRCNYGLKYKKDISESLQYHINLSRKGYRSLIYSGDHDMLVPFLDTQAWIRSLNYSILDDWRQWYTNAQVAGYTRTYSNHMTFATVKGGGHTAPEYRPEECFAMFSRWISNQPL 487
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1802 487 Pfam Serine carboxypeptidase 55 484 IPR001563 GO:0004185|GO:0006508
Glsi08g1802 487 Gene3D - 343 487 - -
Glsi08g1802 487 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 471 IPR001563 GO:0004185|GO:0006508
Glsi08g1802 487 FunFam Carboxypeptidase 389 484 - -
Glsi08g1802 487 SUPERFAMILY alpha/beta-Hydrolases 51 486 IPR029058 -
Glsi08g1802 487 Gene3D alpha/beta hydrolase 45 312 IPR029058 -
Glsi08g1802 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 454 467 IPR001563 GO:0004185|GO:0006508
Glsi08g1802 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 149 159 IPR001563 GO:0004185|GO:0006508
Glsi08g1802 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 148 IPR001563 GO:0004185|GO:0006508
Glsi08g1802 487 PRINTS Carboxypeptidase C serine protease (S10) family signature 184 209 IPR001563 GO:0004185|GO:0006508
Glsi08g1802 487 FunFam Serine carboxypeptidase-like 11 45 487 - -
Glsi08g1802 487 FunFam Carboxypeptidase 341 486 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi08g1802 Glsi-ChrGlsi08 12810085 12813359 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1802 45 74 Calmodulin-binding Proteins AT2G22960 73.333 5.62e-08 51.2
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1802 08 12810085 12813359 Glsi08g1802 08 12810085 12813359 ECH