Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1796 ATGTTCTTTCACGACGAAGAAGCGGTCCAGTTCCCATGTGCCCCTCTCGAAACTATGCTCGCAGAAACTGAAATACAAGAGTTGCTGTCCCTCATTGAACCAGCCAGCCCAAGCTCCGGTTCACAAGGATCAAACCGAGAGGTTTACTCTGTGGACGAAAGAAAGCGCAGGCGCATGGAATCAAACCGGGAGTCAGCCCGAAGGTCCCGCTGGAGAAAGAAGAGGCATCTAGAGAACCTGACGAACCAAGCGAGCCGCTTCAGAATTGAAAACCGACAACTCAAAAACCGACTAGCCTTCACCATGAATCAGCGTCGCCTAGTATCCGTAGAGAATGAGCGCCTAAGATCCGAATCCCTCGCCCTTCTGGCCAAACTTTCGGATCTATGTTGGATTTTAGGCTCCATGCATTCACTAACAGAACACATTATAAGTTAA 438 0.4954 MFFHDEEAVQFPCAPLETMLAETEIQELLSLIEPASPSSGSQGSNREVYSVDERKRRRMESNRESARRSRWRKKRHLENLTNQASRFRIENRQLKNRLAFTMNQRRLVSVENERLRSESLALLAKLSDLCWILGSMHSLTEHIIS 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1796 145 Coils Coil 77 97 - -
Glsi08g1796 145 Gene3D - 52 105 - -
Glsi08g1796 145 FunFam BZIP transcription factor 52 104 - -
Glsi08g1796 145 Pfam bZIP transcription factor 54 99 IPR004827 GO:0003700|GO:0006355
Glsi08g1796 145 SUPERFAMILY Leucine zipper domain 54 104 IPR046347 GO:0003700|GO:0006355
Glsi08g1796 145 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 52 99 IPR004827 GO:0003700|GO:0006355
Glsi08g1796 145 CDD bZIP_plant_GBF1 55 106 IPR045314 GO:0003700|GO:0006355
Glsi08g1796 145 SMART brlzneu 50 114 IPR004827 GO:0003700|GO:0006355
Glsi08g1796 145 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 57 72 IPR004827 GO:0003700|GO:0006355
Glsi08g1796 145 PANTHER BZIP TRANSCRIPTION FACTOR 44 37 136 - -
Glsi08g1796 145 MobiDBLite consensus disorder prediction 48 67 - -
Glsi08g1796 145 MobiDBLite consensus disorder prediction 34 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1796 Glsi-ChrGlsi08 12763597 12764034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1796 19 137 bZIP Transcription Factor Family AT5G15830 41.667 2.46e-19 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi08g1796 bZIP_1 6.4e-08 CL0018