Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1792 ATGGATCTTGGGACGGAGGGTTTGGATGGGTTGGTGGGTTCAGACACTAGGTTTGCTTCATCAGATCCTGAAACAAAGCACAAGTGGTACGGATCTGGATTTCTTAAGCAGGAGAGATCTGGCACCACTGAAGATGACTGGAGGAGCCCCAAACTGGCCAAGACCCATGACATCTCCGCCTCCAAAACATTGCTACTCCAGCCCAGGAACTCTTTACTGAGATCTAATACCACTCTCTTTTCTGATGGTCAGCACCAACAGCAAATGCTCAGCTTCTCTTCTCCAAAATCAGAGCCTCCGTTAGTGGATAAAAATTCCCCCAATATCACATTGCCTTATTCTTACCACCCATTATCTAGTTACAGCAGAAACACAGTTAACGGAAATCTGGGGTGCAGTTTTGAAGGACTGGATTTGGGTAGCGAGTTTTGGAAAATGATGTCCGTTATCCGAGCCAAAAACATGAGTTTTGACGAGTCATCTTGATACAGTTCTGGTTGTGGAAGCATGCACGGGGTCTTAGCAGGGGCCAGAGGGCCATTCACTCCGTCTCAGTGGCTGGAGCTGGAACAGCAGGCCTTGATCTACAAGTACCTAAATTCAAATGTGCCCGTACCATCTCATCTGCTCATCCCCATCAAGAAAGCGCTTGATTCTGCTGGGTTATGTAACTTTTCAAACGGACTTCCGCTGCCTAACACATTGGGGTGGGGGGCTTTTCATCTCGGTTTCTCCAACAACAACGATCCTGAGCCCGGAAGGTGTCGGAGAACAGATGGGAAGAAATGGCGGTGCTCGAGAGATGCCGTTGTGGACCAGAAGTATTGTGAGCGGCACATGAACAGAGGCCGCCATCGTTCAAGAAAGCCTGTGGAAGGCCAATCAGGCCATGCCGTCGCCGGGACCACCACTACAACTAATTCCACCACTTCAAAGCTCATGCCTAATGCTTCCTCGTCTCCCTCGCTACTGCTGCCCGGCTGCGCTCCATCCAACACCCTCAACTTTGCACACCAGGAATCCAAGATTTTGCACCCTGTTGCATCTAATTCCTCGGGGGCTAACAACATCGACAGGATGCTTATGAATAACAAGGAGAATGCGAGTGAGAGAATGCAGGACGCTCCTTCCCTTCCAATGCTTCCTCCTTCTCTTGAACTGAAACCCAAAGAAAACCCCATAATGGTTCATAAACAGCAAATCCAATATGAAGAATGCTCAAGGGATGAGTTTGGGCTTGTCACTTCTGACTCCCTACTTAACCCTTCACATAGAAGCTCCACCCTGCTGAGTAGCAGAAGCTTTGATCCTGCACAAAACCCCACTGACCAAGAATCTGAATCGCAACAATCGCTTAGGCATTTCATTGATGACTGGCCCAGAAATCAGAGTGATCGCTCCGGTGTTTCATGGCCCGAACTGGAGATGCAATCGGAGAGGACCCAGCTATCAATTTCAATCCCCATGACTTCCTCTCCCATCAGTGAAAAAATAACATTGTCACCTCTCCGACTATCAAGGGAGTTGGACCCAATTCAAATGGGTTTGGGTGTGGGAAATGATGTCAGCGAATCAAATAGTAGGCAGGCTAATTGGGTTCCAATTACTTGGGAGAGTTCTATGGGAGGCCCTCTTGGAGAAGTTCTTCATCTTAGTAATAACAATACAGGTGACTGCGCCAAGAACTCCTCTGCTCTTAACCTCATGAGTGATGGTTGGGACAATAGTCCTCCATTAGGGTCATCTCCCACCGGGGTTCTGCAGAAGACTGCATTTGTGTCGCTTTCCAATAGCAGCGCTGGAAGCAGCCCGAGGGCAGAAAATAAAACCCACGAAGGGGCCAGCTTGTGCAATGACCTCCTTGGACCAAATCTTGGTAATTCTTCTTCCTTGCCTGCCTTGTAA 1905 0.4871 MDLGTEGLDGLVGSDTRFASSDPETKHKWYGSGFLKQERSGTTEDDWRSPKLAKTHDISASKTLLLQPRNSLLRSNTTLFSDGQHQQQMLSFSSPKSEPPLVDKNSPNITLPYSYHPLSSYSRNTVNGNLGCSFEGLDLGSEFWKMMSVIRAKNMSFDESSXYSSGCGSMHGVLAGARGPFTPSQWLELEQQALIYKYLNSNVPVPSHLLIPIKKALDSAGLCNFSNGLPLPNTLGWGAFHLGFSNNNDPEPGRCRRTDGKKWRCSRDAVVDQKYCERHMNRGRHRSRKPVEGQSGHAVAGTTTTTNSTTSKLMPNASSSPSLLLPGCAPSNTLNFAHQESKILHPVASNSSGANNIDRMLMNNKENASERMQDAPSLPMLPPSLELKPKENPIMVHKQQIQYEECSRDEFGLVTSDSLLNPSHRSSTLLSSRSFDPAQNPTDQESESQQSLRHFIDDWPRNQSDRSGVSWPELEMQSERTQLSISIPMTSSPISEKITLSPLRLSRELDPIQMGLGVGNDVSESNSRQANWVPITWESSMGGPLGEVLHLSNNNTGDCAKNSSALNLMSDGWDNSPPLGSSPTGVLQKTAFVSLSNSSAGSSPRAENKTHEGASLCNDLLGPNLGNSSSLPAL 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1792 634 ProSiteProfiles QLQ domain profile. 180 215 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi08g1792 634 MobiDBLite consensus disorder prediction 596 622 - -
Glsi08g1792 634 ProSiteProfiles WRC domain profile. 249 293 IPR014977 -
Glsi08g1792 634 MobiDBLite consensus disorder prediction 297 331 - -
Glsi08g1792 634 MobiDBLite consensus disorder prediction 1 24 - -
Glsi08g1792 634 Pfam QLQ 180 213 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi08g1792 634 MobiDBLite consensus disorder prediction 364 387 - -
Glsi08g1792 634 MobiDBLite consensus disorder prediction 416 449 - -
Glsi08g1792 634 MobiDBLite consensus disorder prediction 280 331 - -
Glsi08g1792 634 Pfam WRC 250 292 IPR014977 -
Glsi08g1792 634 PANTHER GROWTH-REGULATING FACTOR 5 136 492 IPR031137 GO:0005634|GO:0006351|GO:0032502
Glsi08g1792 634 MobiDBLite consensus disorder prediction 416 468 - -
Glsi08g1792 634 SMART QLQ_2 179 215 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1792 Glsi-ChrGlsi08 12726144 12729068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1792 31 592 GRF Transcription Factor Family AT2G22840 41.724 2.03e-97 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Glsi08g1792 WRC 6e-21 No_clan