Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1785 ATGCTACAGTTCTCCGACCGCAAGTACCGCCGCAGCCCCAAAAGCTCCGCTCTTCTTCCCACAAACAAACAAGACTATTACGAACCAATTATCGAAGCAGGTTTCGATGGCGCATCGTTCTCCGGTGCGGTGTTTAACCTCTCCACCACAATCGTCGGTGCTGGCATCATGGCACTTCCGGCTGCCGTCAAGCAATTGGGGTTAATGCCTGGCCTTATTATGATCGCTCTGTGCGCCATATTAACCGAATCGTCCGTTGACATGCTCCTGAGGTTCACCCGTGTGTCCAAGTCCTCCACCTATCCTGGTGTTGTTTGCGACGCTTTCGGTGGGGTTGGGCGGGTCCTTTTGCAGGTCTGCATTGTAGTCAACAATACGGGAATGCTTATTGTCTACATGATCATTATCGGAGATGTGTTATCGGGAACGTGGTCGGAAGGGGTCCACTATTCGGGGGTCATTGAAGAATGGTTTGGTCAACATTGGTGGTCAACACGTTCAGTCTTACTGCTGCTCACGACCCTGCTGGTCTTCCTGCCTCTCATTTCATTCAAGCGCGTAGATTCTTTGAGATACACATCAGCATTGTCAGTGGGATTAGCTGTTGTTTTTGTGGTGATAACAGCAGGAGTAGCAATTGTTAAGTTAATCAATGGAAGCATTGGGATGCCCCGCTTAATGCCAAAGTTCACTGGCCAGGAATCTTTTTGGAAGCTTTTCACAACTATCCCTATTTTAGTCACTGCTTACATCTGCCATCATAATGTTCATCCTATAGCAAATGAACTAAAAGACCCTACCCATATGAAGTCTATAGTCCGGACATCCCTCTCATTATGCTCGTGCGTGTACATAGCGACCAGTCTTTTTGGTTTTTTGTTATTTGGGGATAAAACACTGGATGATGTACTTGCTAACTTTGATGGGGATCTTGGAGTCCCTTTTGGGTCCTTGCTTAATGATGTGGTGAGATTGAGTTATGGCATTCACCTTATGCTGGTGTTCCCCATTGTGTTTTACTCCCTGCGCCTCAACCTCGATGGTCTTGTGTTTCCATATGCCATTCCCATTGCCTATGACAACAGGAGATTCTATCTGGTGACTGCATTTCTCATGGTTTTCATTTTTGTTGGAGCCAATTATGTGCCCAGCATATGGGATGCCTTCCAGTTCACAGGTGCCACTGCAGCCATTTCTGCTGGATTCATATTTCCTGCAGCTATTGCTCTTAGGGACACCCATGGAGTTGCAACAAAGGAGGACAGGCTATTATCATGGGTAATGATATTTTTGGCTGTGTCATCAAGTACCGTAGCCATCTCCAGTGACTTGTATAGCGTCTTCAGTGATAAAGCAGCAACAGCTGGAACCTGA 1374 0.468 MLQFSDRKYRRSPKSSALLPTNKQDYYEPIIEAGFDGASFSGAVFNLSTTIVGAGIMALPAAVKQLGLMPGLIMIALCAILTESSVDMLLRFTRVSKSSTYPGVVCDAFGGVGRVLLQVCIVVNNTGMLIVYMIIIGDVLSGTWSEGVHYSGVIEEWFGQHWWSTRSVLLLLTTLLVFLPLISFKRVDSLRYTSALSVGLAVVFVVITAGVAIVKLINGSIGMPRLMPKFTGQESFWKLFTTIPILVTAYICHHNVHPIANELKDPTHMKSIVRTSLSLCSCVYIATSLFGFLLFGDKTLDDVLANFDGDLGVPFGSLLNDVVRLSYGIHLMLVFPIVFYSLRLNLDGLVFPYAIPIAYDNRRFYLVTAFLMVFIFVGANYVPSIWDAFQFTGATAAISAGFIFPAAIALRDTHGVATKEDRLLSWVMIFLAVSSSTVAISSDLYSVFSDKAATAGT 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1785 457 PANTHER AMINO ACID TRANSPORTER 37 434 - -
Glsi08g1785 457 Pfam Transmembrane amino acid transporter protein 38 438 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1785 Glsi-ChrGlsi08 12683386 12686357 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1785 7 452 Amino Acid or Auxin Permease AAAP Family AT3G30390 58.520 0.0 540