Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1724 ATGGAGGATCTCGAGGAGGAAGAGAAAGGAGAACAGGAGGTGTTAGGTTCGAGCTTGACCATGGAGAAGGTGGCGGCAGCCAAGAAGTTCATAGAGAACCACTATAGGAATCAGATGAAGAACATCCAAGAGCGGAAGGAGAGACGTTGGATTCTGGAAAGGAAATTAGCTTCCTCGGATGTGCCAAATGAGGAACGGATCAACCTCATCAAAGATTTAGAACGAAAGGAGACAGAATATATGCGATTGAAAAGGCACAAGATATGTGTTAATGATTTTGAGCTTTTAACTATCATTGGAAGAGGGGCCTTTGGGGAGGTTAGATTGTGTCGAGAGAAGAAATCTGGAAATATTTATGCCATGAAAAAGCTGAAGAAATCTGAAATGCTCAAGAGAGGCCAGGTGGAACATGTTAGAGCTGAGAGGAACCTGCTGGCTGAAGTTGCCAGTCATTGCATAGTGAAACTTTACTACTCATTTCAGGATGCTGATTACTTGTATTTAATTATGGAATATCTGCCTGGGGGTGACATGATGACTCTGCTGATGAGGGAAGACACCTTAAGTGAAAGTGTTGCTAGATTTTACATTGCACAGAGTGTTCTGGCCATAGAGTCTATTCATAAACACAATTACATTCACAGAGATATTAAACCAGATAACCTACTTCTGGACAAAAATGGTCACATGAAGCTCTCAGATTTTGGGCTCTGTAAGCCTCTTGATTGTACTACCCTGTCAACGCTTCATGAGAATCAGACCATGGATGATGAAAATTTGGCAGAGCCAATGGATATTGATGGATATCAGAGCAGTTGGAGAAGTCCACGCGAACAACTTCAGCATTGGCAGATGAACAGGAGGAAGTTGGCATTTTCCACAGTGGGAACACCAGACTACATTGCTCCTGAAGTTCTGCTGAAAAAAGGATATGGGATGGAATGTGACTGGTGGTCACTGGGTGCAATAATGTACGAAATGCTGGTTGGTTACCCTCCATTTTACTCCGATGACCCAATAACCACATGCAGAAAGATTGTTCATTGGAGAAATCATTTAAAATTTCCAGAAGATTCACAGTTGACACTTGAGGCCAAAGATCTAATCTGCAGACTGCTGTGTGATGTTGAACATAGGTTAGGTACTCAAGGGGCAAATGAAATCAAGGCTCATCCTTGGTTTAACGATGTGGAGTGGGATAAACTGTATGAAACGGAGGCAGCATTTAAACCACAAATCAATGGGGAGCTGGACACCCAAAACTTCATGAAATTTGATGAAGTAGATCCACCAACAGCAGCAAGAACTGGATCAGGTCCCTCACGAAAGATGCTACTAACTCCCAAAGATCTAAACTTTGTTGGTTACACCTACAAGAACTTTGATGCTGTGAAAGGGCTTCGCCAGTCTTTTGGTGATGCCATGCAAGATTACTCTTCTAAACGGGCAGCTGAGGAAACAGGTTTACAAATGCTTGCTTCGTCCGGGGATCCCATGTTACCATAA 1506 0.429 MEDLEEEEKGEQEVLGSSLTMEKVAAAKKFIENHYRNQMKNIQERKERRWILERKLASSDVPNEERINLIKDLERKETEYMRLKRHKICVNDFELLTIIGRGAFGEVRLCREKKSGNIYAMKKLKKSEMLKRGQVEHVRAERNLLAEVASHCIVKLYYSFQDADYLYLIMEYLPGGDMMTLLMREDTLSESVARFYIAQSVLAIESIHKHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCTTLSTLHENQTMDDENLAEPMDIDGYQSSWRSPREQLQHWQMNRRKLAFSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPITTCRKIVHWRNHLKFPEDSQLTLEAKDLICRLLCDVEHRLGTQGANEIKAHPWFNDVEWDKLYETEAAFKPQINGELDTQNFMKFDEVDPPTAARTGSGPSRKMLLTPKDLNFVGYTYKNFDAVKGLRQSFGDAMQDYSSKRAAEETGLQMLASSGDPMLP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1724 501 ProSiteProfiles AGC-kinase C-terminal domain profile. 395 468 IPR000961 GO:0004674|GO:0005524|GO:0006468
Glsi08g1724 501 ProSitePatterns Serine/Threonine protein kinases active-site signature. 212 224 IPR008271 GO:0004672|GO:0006468
Glsi08g1724 501 SUPERFAMILY Protein kinase-like (PK-like) 76 440 IPR011009 -
Glsi08g1724 501 Pfam Protein kinase domain 94 243 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1724 501 Pfam Protein kinase domain 286 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1724 501 ProSitePatterns Protein kinases ATP-binding region signature. 99 122 IPR017441 GO:0005524
Glsi08g1724 501 FunFam Non-specific serine/threonine protein kinase 54 176 - -
Glsi08g1724 501 SMART pkinase_C_6 395 460 IPR000961 GO:0004674|GO:0005524|GO:0006468
Glsi08g1724 501 CDD MobB_NDR_LATS-like 27 88 - -
Glsi08g1724 501 Gene3D Phosphorylase Kinase; domain 1 91 176 - -
Glsi08g1724 501 Gene3D Phosphorylase Kinase; domain 1 413 423 - -
Glsi08g1724 501 FunFam Non-specific serine/threonine protein kinase 293 412 - -
Glsi08g1724 501 CDD STKc_NDR_like 91 459 - -
Glsi08g1724 501 PANTHER SERINE/THREONINE-PROTEIN KINASE 14 429 - -
Glsi08g1724 501 SMART serkin_6 93 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1724 501 FunFam Non-specific serine/threonine protein kinase 177 244 - -
Glsi08g1724 501 Gene3D Transferase(Phosphotransferase) domain 1 293 412 - -
Glsi08g1724 501 Gene3D Transferase(Phosphotransferase) domain 1 177 245 - -
Glsi08g1724 501 ProSiteProfiles Protein kinase domain profile. 93 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1724 501 Pfam Protein kinase C terminal domain 413 458 IPR017892 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1724 Glsi-ChrGlsi08 12261824 12273351 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1724 1 500 AGC Kinase Gene Family AT4G33080 79.175 0.0 831
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Glsi08g1724 Pkinase 1.1e-43 CL0016