Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1719 ATGCTCCACGTGGCTCCGATACTCGCTGACGTGGCAATCTCTGCCCTTTGTTCCTTACACCTGTCTGAACTCGGACCGCCACTGGGATGCTTTTGATTCCATGCGAGGCTGAATCCTTCGTGGATTACCCAAAGTTCTGCGCTGAAGGCATTGCAGGATTCCATATTCTTGCTGAAGCCACTCACCCAAGTGCCTTGTTCATCTCTTGTGATTCCATCGCATCCTGCCGCTATTCTAGGTTCCGTGAAAGTTCCTTCACAGTCAGAAGGCTTCCATGGGTCACTTGTCCCAAGAAGCAGCTTATTCTCCCGAGCCCGACCCAATTCCATAAACAAGACTGACGTAGAGTTTTCATCTTGCTTTGAGTTTTCATCTTGTCCCAATATGGCGGCGAACCAGGCACAGGAGAGAGAAGGACTATGGTTGAAGGAAACAGGGAGCAGACAAGTTGACCTTGAAAAGTGTAGGTGTCAGGAGACCGGTCAAAACCCCAGAGTAAGGAGTAGTGGGCCAGAAAAGGAGGAAAGTGGGCCCAGTAGAGGCAAGCGATCAGAGGGCCTGGGCATGAGCAGGCGGACCAGCAACCAGGAGTATTTTGGATTAAGAGAACTTGGGCTGGAGAGCCCTAGTACAACTAACGAGCAAGGCGAAATGGAAGCCCAAGCACGAATGGGCCATGGGTGGAGCAGTGGGCCAGAAGTTAGCCCACAGGATCACCCGATAAAGGAGCAAAAGGGTAAGGAGAAAATGAAAAGCCTAGTAGTAAACAAAGAGCCAAAAGTCCCGGAAGCCCAAGAAAAAGAGGGTCTGGAGCAAAGGAGTGAGAAAGGCCCGCAGGAAGAGGTGGAAAAGAAGCAGAAGTGGGAGGGAAGAATGAAGAACACAGGGAACAACTACGAAGGAGGTCCAGATTATCACCCTAGCAGCACAAAGATCCCAGAGAGTACAAGTATAGCTACATTGAAGTGGAAAAGAAGAGATAGAAGAGTTGAAAATTATAACCATTATTTTGTGGAATTTCCAAGTGAGGATGAGGCTGAGGACGGCGCTGTGGAGGAAGGAACAGAAAAAACATGGACTATAGTGAAAAATGTTCTAGCTGCTGATATAAGCAGACTCCTCTGCCTGAAGAGGTCCAGAACAGAGACAGAGGGTAACAAAGCTGGGCATAGAGAAGAAGAAGGAGGGAGCAGGAAAATGAAGAGATTAATGTGGCTAGTGAATGAAAATGTCCAGGAAACAGGGGTTGAGGACCAGTGTATGTCGTTGGCTGGGGATGATGAGAATTCCAGCAAAGTGGCGAATATGAGTTTAAGTGCAGCCGAGGATGATTCGTCTTCAGAAATTCATATCCCAGCCGAAATAGACTGGCACATGCTTGACAAGTCCAAATTCTTCTTCCTTGGCGCGGCTTTATTTTCCGGTGTATCAGCTGGGCTTTATCCTATTGTTGTGTTGAAGACCCGCCAGCAGGTTACTTCAGCACACATTTCTTGCTTGAAAATGTCTTTTGCCATTATGCGCTACGAAGGGTTCAGAGGGTTTTATAGAGGTTTTGGTACTTCTTTGATGGGAACAATCCCTGCTCGAGCACTTTACATGGGTGCTCTCGAAGTTACAAAGAGTAATGTAGGTACTGCTACTGTTGAATTGGGGTTTTCAGATACCACAGCCACCGCCGTAGCTAATGCTGCTGCAGGAGTGAGTTCTGCTATGGCTGCACAATTAGTTTGGACCCCAGTTGATGTGGTGAGCCAAAGACTTATGGTTCAAGGCTGCAGTAGCAGCACGAATATGCTCCGTAATGTTAATTGTGGAAATTACAGGAATGGTCTTGATGCGTTCAGGAAAATTCTTTGTGCAGATGGAGTGCGAGGATTGTATAGGGGATTTGGATTTTCAATACTGACTTATGCACCATCCAATGCGGTTTGGTGGACTTGTTACTCCATGGTCCATAGGCTCATTTGGGGTGCTTTTGGTTGCCATATGGGTCAGAGGGATGAGAATAATATGGGCAATGGTTGTGGTTTTAGGCCTAATTCCAAGGCAATGGTAGCAGTCCAAGGGTTGAGTGCGGTTATGGCCAGTGGGGTTTCAGCTATTATTACGATGCCACTTGACACAATCAAGACAAGGTTGCAGGTGTTGGATGCGCAGGAAAATGGAAAGAGGAGACCATTAACTGTTGTGCAGACAGTTAGGAATCTGGTGAAGGAAGGTGGCCTCCTTGCATGTTACAGAGGATTGGGTCCAAGGTGGGCTTCAATGTCCATGTCTGCAACAACCATGATTACTACCTATGAGTTTTTGAAACGAATGTCCACCAAGACCCAAGAGAAAGTAACTGCATAA 2355 0.473 MLHVAPILADVAISALCSLHLSELGPPLGCFXFHARLNPSWITQSSALKALQDSIFLLKPLTQVPCSSLVIPSHPAAILGSVKVPSQSEGFHGSLVPRSSLFSRARPNSINKTDVEFSSCFEFSSCPNMAANQAQEREGLWLKETGSRQVDLEKCRCQETGQNPRVRSSGPEKEESGPSRGKRSEGLGMSRRTSNQEYFGLRELGLESPSTTNEQGEMEAQARMGHGWSSGPEVSPQDHPIKEQKGKEKMKSLVVNKEPKVPEAQEKEGLEQRSEKGPQEEVEKKQKWEGRMKNTGNNYEGGPDYHPSSTKIPESTSIATLKWKRRDRRVENYNHYFVEFPSEDEAEDGAVEEGTEKTWTIVKNVLAADISRLLCLKRSRTETEGNKAGHREEEGGSRKMKRLMWLVNENVQETGVEDQCMSLAGDDENSSKVANMSLSAAEDDSSSEIHIPAEIDWHMLDKSKFFFLGAALFSGVSAGLYPIVVLKTRQQVTSAHISCLKMSFAIMRYEGFRGFYRGFGTSLMGTIPARALYMGALEVTKSNVGTATVELGFSDTTATAVANAAAGVSSAMAAQLVWTPVDVVSQRLMVQGCSSSTNMLRNVNCGNYRNGLDAFRKILCADGVRGLYRGFGFSILTYAPSNAVWWTCYSMVHRLIWGAFGCHMGQRDENNMGNGCGFRPNSKAMVAVQGLSAVMASGVSAIITMPLDTIKTRLQVLDAQENGKRRPLTVVQTVRNLVKEGGLLACYRGLGPRWASMSMSATTMITTYEFLKRMSTKTQEKVTA 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1719 784 PRINTS Mitochondrial carrier protein signature 567 589 IPR002067 GO:0055085
Glsi08g1719 784 PRINTS Mitochondrial carrier protein signature 516 534 IPR002067 GO:0055085
Glsi08g1719 784 Gene3D Mitochondrial carrier domain 465 783 IPR023395 -
Glsi08g1719 784 MobiDBLite consensus disorder prediction 168 187 - -
Glsi08g1719 784 MobiDBLite consensus disorder prediction 238 291 - -
Glsi08g1719 784 ProSiteProfiles Solute carrier (Solcar) repeat profile. 461 543 IPR018108 -
Glsi08g1719 784 ProSiteProfiles Solute carrier (Solcar) repeat profile. 684 774 IPR018108 -
Glsi08g1719 784 ProSiteProfiles Solute carrier (Solcar) repeat profile. 558 655 IPR018108 -
Glsi08g1719 784 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 445 780 - -
Glsi08g1719 784 MobiDBLite consensus disorder prediction 153 312 - -
Glsi08g1719 784 SUPERFAMILY Mitochondrial carrier 459 771 IPR023395 -
Glsi08g1719 784 Pfam Mitochondrial carrier protein 687 777 IPR018108 -
Glsi08g1719 784 Pfam Mitochondrial carrier protein 472 543 IPR018108 -
Glsi08g1719 784 Pfam Mitochondrial carrier protein 559 657 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1719 Glsi-ChrGlsi08 12230250 12240719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1719 436 780 Chloroplast and Mitochondria Gene Families AT1G72820 66.954 1.61e-158 462