Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1706 ATGATATTACTAGCAGCTTGCCCACCATACAATCCAACTCCTTTCTCTAATGGATCACTCGACAGACCTGGTACTTATTTTCTTTACATCCCCATGTTTTATGCTAACTTGAAACAATTGGTAGCATCAAGCACCGGAATCTGGTTAGTCTCCAAGGTTACTCCCTTGTCTCCTTATGGGAATCTTCTTTTCTATACTACATGGAATAGGGCAGTTTATGGGACCTTCTTCATGGAACCGAGAATGAACCTGCGCGAGGGCTCCAAAGTTTGGGTGGAAGACAGAGATTTGGCTTGGGTGGCTGCTGAAGTACATCACTTTGCTGGCAAGCAAGTCCACCTTGTTACTGCTTCCGGGAAGAAGGTTTTTGCTCTACCAGAGAAACTGTTCCCAAGGGATGCAGATGAAGAGGAGCATGGGGGAGTGGAAGATATGACGAGGTTGGCTTACCTGAATGAGCCGGGAGTATTGTATAATCTTCGTAGAAGATATGCCCTGAATGATATATATACATATACAGGGAGCATTTTAATAGCTCTTAATCCATTCACAAAGCTTCCTCATTTGTATGATATCCATATGATGGAGCAGTATAATGGAGCTCCATTTGGTGAGCTCAGCCCACATGTATTTGCTGTGGCTGATGCCTCTTATAGAGCGATGATGAATGAAGGTCGAAGCCAGTCTATCTTGGTCAGTGGTGAAAGTGGTGCTGGGAAAACTGAGACGACAAAATTGATTATGCAGTATCTTACCTTTGTTGGAGGACGTGCCTCAGGTGATGATAGAACAGTTGAGCAACAAGTTCTTGAATCGAATCCACTCTTGGAGGCTTTTGGTAATGCAAGGACTGTCAGGAATGACAACTCAAGTCGTTTTGGGAAGTTTGTTGAAATTCAGTTTGATTCAAATGGTAGAATATCTGGTGCTGCAATTAGAACTTACTTATTGGAAAGATCGCGAGTAGTGCAGATAACAGATCCTGAAAGAAACTATCATTGCTTTTATCAGTTATGTTCATCTGAAAGGGATGCTGAGAAGTATAAGTTAGGACATCCAAGCCACTTCCACTATTTAAATCAAAGTAAAACTTATGAATTGGATGGAGTAAGCAGTGCTGAAGAATACATGAAGATAAGGGGGGCAATGGATATAGTTGGCATAAGTCTTGAGGATCAGGAAGCCATATTTCGCACATTAGCTGCAATTTTACATTTGGGAAACGTTGAATTTTCTCCTGGAAAAGAGCATGACTCGTCAGTTATAAAGGATGAGAAATCAAAATTTCATTTGCAGATGGCAGCCAATCTGTTCATGTGTGATGTGAATCTACTGTTAGCAACATTGTGTACTCGCACAATACAAACCCGTGAAGGAAGTATTGTGAAAGCTCTTGATTGCAATGCTGCTATTGCTGGGCGGGATGTTTTGGCAAAAACTGTTTATGCCCGCCTATTTGACTGGCTTGTTGATAAAATCAATACGTCTGTTGGGCAAGATATCAATTCCCAGATACAAATTGGAGTTTTGGATATATATGGTTTTGAGTGCTTTAAGGATAACAGTTTTGAGCAATTCTGCATTAATTTTGCTAATGAAAAGCTTCAGCAACATTTTAATGAGCATGTATTCAAAATGGAGCAGGAGGAGTATAGCAAAGAAGAAATTAATTGGAGTTACATTGAATTTATTGACAACCAAGATGTTTTAGATTTGATTGAGAAGAAGCCCATTGGTATCATTGCTCTGTTGGATGAAGCTTGCATGTTCCCAAAATCAACACATCAAACATTCTCAACCAAGTTGTTTCAGCATTTACGGTCGCACCCAAGGTTGGGAAAGGAAAAGTTCTCAGAAACAGATTTTACTGTTTCTCATTATGCTGGAAAGGTCACTTATCATACAGATACCTTTTTGGACAAAAATCGTGATTATGTTGTTGTAGAACATTGCAATCTATTGTCTTCTTCCAAATGCCCCTTTGTGTGTGGTCTTTTTCCTTTGCTGCAGGAGGAATCTTCTAGATCATCATACAAGTTTTCTTCTGTAGCCTCCAGATTTAAGCAACAACTTCAAGCACTCATGGAGACCCTTAACTCAACAGAGCCTCATTACATACGATGTGTGAAGCCAAACTCTCTGAATCAACCACAAAGGTTTGAGAATTCAAGTGTCATACACCAATTACGCTGTGGGGGTGTCCTTGAAGCTGTTAGGATAAGTCTGGCAGGGTACCCCACTCGTAGGACTTACTCAGAGTTTGTAGACCGCTTTGGGTTAATAGCTTCTGAATTTGTGGATGGAAGTTACGATGAAAAAACTACAACTGCAAATATTTTGCAAAAGCTAAAGCTTGAAAATTTTCAGTTGGGCAGGACCAAAGTATTTCTCAGGGCTGGTCAAATTGGCATTTTAGACTCCCGACGTGCTGAAGTTTTGGACAATGCTGCAAAGTGTATTCAGCGCCGGTTGAGAACATTTATTGCACACAGGGATTTTATCTCCATCCGAGCTGCTGCATTTTCTCTTCAGGCATACTGCAGGGGATGCCTTGCCCGGAAGATGTTTGCTGTTAAACGCGAAATGGCTGCAGCTATCTTCATTCAGAAATATAGTCGTATGTGGTTAATGAAGCATGCTTACTTGAAACTGTATTCTTCTTCTATTATCATACAATCCTTTGTTCGTGGTTTTGCAACTCGCCAAAGATTCTTGCATGGAAAAGAACACAAAGCTGCTACTTTTATTCAGGCATGTTGGAAGATGTCCAAAATTCGGTCAGCTTTCCGACGTCATCAAGCTTCAATTGTGGCAATTCAGTGCCTTTGGCGGTGTAAACAAGCGAAAAGAGAACTTCGTAGATTGAAACAAGAGGCTAATGAAGCTGGTGCCTTGCGTTTAGCTAAGAGTAAACTTGAGAAGCAATTGGAAGATCTTACATGGCGTTTGCATCTTGAGAAAAGAATAAGGGTTTCTAATGAAGAGGCTAAGCTAGTGGAGATGTCAAAACTTCAAAAGATGCTAGAAGCTCTGCATCTTGAATTAGATGCAGCTAAATTGGCAGCTGTTAATGAGTGTAACAAGAATGCAGTGCTTCAAAATCAATTGGAATTGTCAGTAAAGGAGAAATCTGCTTTAGAAAGAGAGCTAGTTGCAATGGATGAACTGCGAAAGGAAAATGCTCTATTGAAGAGTTCTTTGGATGCATTTGAAAAGAAGAATGCGGCCTTGGAGCTTGAGCTTATGAAGGCACAAAAAGCCAGTAGTGATACCATTGGGAAATTGATGGAGGTTGAACAGAAATGTTCTCAACTCCAGCAAAACGTGAAAAGTCTCGAGGAGAAATTATTGTCTTTAGAGGATGAAAACCATGTCCTTCGTCAGAAAGCCCTAACTCCATCTCCTAAGAGTAACCTTCCTGGTTTCGCAAAGTCATTGTCAGAAAAATACTCGAGTGCAATGGCTTCTCGCACCGAACGAAAGCCCATATTTGAGTCACCCACTCCCACGAAACTTATTGCCCCCTTTACACTGGGCTTGTCAGACTCTCGTCGATCTAAGCTAACTGCTGAGAGGCATCAGGATAGCTATGAATTCCTCTCTAGGTGTATCAAAGAAGATTTAGGTTTCAAAAATGGTAAACCACTGGCAGCATGTATCATATACAAGTGTCTTCTTCATTGGCATGCCTTTGAATCTGAGCGCACAGCCATTTTTGATTACATAATTGAGGGAATTAATGAAGCTTTAAAGGTTAGGGATGATGACATTGTCTTGCCATATTGGCTGTCCAATACCTCTGCGCTTCTATGCCTGTTACAAAGGAACCTACGTTCAAATGGCTTTCTAACTACTGCCCAACGTTATACTGGATCTTCTGGCTTGACCAGCCGGATTGGGCATGGACTGAAATCTCCATTAAAATTTATTGGATATGATGATGGTATGTCACATGTAGAGGCAAGGTATCCCGCTATACTTTTCAAACAACAACTAACTGCTTGCGTAGAGAAGATTTTTGGCCTGATACGTGATAATTTGAAGAAGGAACTCTCTCCACTTCTGAGCATATGCATTCAGGCACCCAAAACTGGACGAGCACATGGTGGAAAATCATCTAGGTCTCCTGGTGGAGTTCCTCAACAATCACCCGGTGGTCAATGGGACAACATTATTAAATTTTTGGATTCACTTATGAGCCGACTTTGTAGAAATCATGTACCATCCTTCTTCATCCGTAAACTAGTTACACAGGTTTTCTCCTTCATCAATATTACACTCTTCAACAGTCTTCTCTTACGGCGTGAATGTTGTACCTTCTCAAATGGGGAATATGTGAAATCTGGTCTAGCAGAACTGGAGAAATGGATAGTTAATGCGAAGGAGGAGTATGCAGGAACATCCTGGCATGAGCTAAATTATATAAGACAAGCTGTTGGATTTCTGGTAATACATCAGAAGAGGAAGAAATCTTTGGAAGAGATTCGGCAGGATCTTTGTCCGGCATTGACTGTGAGGCAAATCTATCGCATAAGTACTATGTACTGGGATGACAAGTATGGAACCCAGAGTGTGTCCAATGAGGTAGTTAGTGAGATGAGGGAAATCGTGAGCAAGGACAATCAAAATCTGACCTCAAATTCATTCTTGTTGGATGATGATCTGAGCATTCCTTTTTCTGCTGAAGACATAGATATGGCAATTCCTGCTATAGATCCCGGTGACGTTGATCTTCCAGCATTTCTGTCGGAATATCCTTGTGCCCAATTTCTTGTTGCACATTAG 4785 0.4104 MILLAACPPYNPTPFSNGSLDRPGTYFLYIPMFYANLKQLVASSTGIWLVSKVTPLSPYGNLLFYTTWNRAVYGTFFMEPRMNLREGSKVWVEDRDLAWVAAEVHHFAGKQVHLVTASGKKVFALPEKLFPRDADEEEHGGVEDMTRLAYLNEPGVLYNLRRRYALNDIYTYTGSILIALNPFTKLPHLYDIHMMEQYNGAPFGELSPHVFAVADASYRAMMNEGRSQSILVSGESGAGKTETTKLIMQYLTFVGGRASGDDRTVEQQVLESNPLLEAFGNARTVRNDNSSRFGKFVEIQFDSNGRISGAAIRTYLLERSRVVQITDPERNYHCFYQLCSSERDAEKYKLGHPSHFHYLNQSKTYELDGVSSAEEYMKIRGAMDIVGISLEDQEAIFRTLAAILHLGNVEFSPGKEHDSSVIKDEKSKFHLQMAANLFMCDVNLLLATLCTRTIQTREGSIVKALDCNAAIAGRDVLAKTVYARLFDWLVDKINTSVGQDINSQIQIGVLDIYGFECFKDNSFEQFCINFANEKLQQHFNEHVFKMEQEEYSKEEINWSYIEFIDNQDVLDLIEKKPIGIIALLDEACMFPKSTHQTFSTKLFQHLRSHPRLGKEKFSETDFTVSHYAGKVTYHTDTFLDKNRDYVVVEHCNLLSSSKCPFVCGLFPLLQEESSRSSYKFSSVASRFKQQLQALMETLNSTEPHYIRCVKPNSLNQPQRFENSSVIHQLRCGGVLEAVRISLAGYPTRRTYSEFVDRFGLIASEFVDGSYDEKTTTANILQKLKLENFQLGRTKVFLRAGQIGILDSRRAEVLDNAAKCIQRRLRTFIAHRDFISIRAAAFSLQAYCRGCLARKMFAVKREMAAAIFIQKYSRMWLMKHAYLKLYSSSIIIQSFVRGFATRQRFLHGKEHKAATFIQACWKMSKIRSAFRRHQASIVAIQCLWRCKQAKRELRRLKQEANEAGALRLAKSKLEKQLEDLTWRLHLEKRIRVSNEEAKLVEMSKLQKMLEALHLELDAAKLAAVNECNKNAVLQNQLELSVKEKSALERELVAMDELRKENALLKSSLDAFEKKNAALELELMKAQKASSDTIGKLMEVEQKCSQLQQNVKSLEEKLLSLEDENHVLRQKALTPSPKSNLPGFAKSLSEKYSSAMASRTERKPIFESPTPTKLIAPFTLGLSDSRRSKLTAERHQDSYEFLSRCIKEDLGFKNGKPLAACIIYKCLLHWHAFESERTAIFDYIIEGINEALKVRDDDIVLPYWLSNTSALLCLLQRNLRSNGFLTTAQRYTGSSGLTSRIGHGLKSPLKFIGYDDGMSHVEARYPAILFKQQLTACVEKIFGLIRDNLKKELSPLLSICIQAPKTGRAHGGKSSRSPGGVPQQSPGGQWDNIIKFLDSLMSRLCRNHVPSFFIRKLVTQVFSFINITLFNSLLLRRECCTFSNGEYVKSGLAELEKWIVNAKEEYAGTSWHELNYIRQAVGFLVIHQKRKKSLEEIRQDLCPALTVRQIYRISTMYWDDKYGTQSVSNEVVSEMREIVSKDNQNLTSNSFLLDDDLSIPFSAEDIDMAIPAIDPGDVDLPAFLSEYPCAQFLVAH 1594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1706 1594 Gene3D Myosin VI head, motor domain, U50 subdomain 389 679 - -
Glsi08g1706 1594 Coils Coil 938 975 - -
Glsi08g1706 1594 ProSiteProfiles IQ motif profile. 836 865 IPR000048 GO:0005515
Glsi08g1706 1594 Pfam IQ calmodulin-binding motif 910 930 IPR000048 GO:0005515
Glsi08g1706 1594 Pfam IQ calmodulin-binding motif 887 904 IPR000048 GO:0005515
Glsi08g1706 1594 Pfam IQ calmodulin-binding motif 837 854 IPR000048 GO:0005515
Glsi08g1706 1594 Pfam IQ calmodulin-binding motif 863 881 IPR000048 GO:0005515
Glsi08g1706 1594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 860 959 IPR027417 -
Glsi08g1706 1594 CDD MyosinXI_CBD 1191 1562 IPR037975 GO:0007015
Glsi08g1706 1594 SMART MYSc_2a 134 811 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi08g1706 1594 Pfam DIL domain 1415 1518 IPR002710 -
Glsi08g1706 1594 ProSiteProfiles IQ motif profile. 884 913 IPR000048 GO:0005515
Glsi08g1706 1594 Coils Coil 1001 1021 - -
Glsi08g1706 1594 Gene3D - 516 701 - -
Glsi08g1706 1594 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 85 134 IPR004009 GO:0003774|GO:0005524|GO:0016459
Glsi08g1706 1594 Pfam Myosin head (motor domain) 142 798 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi08g1706 1594 Coils Coil 1095 1129 - -
Glsi08g1706 1594 MobiDBLite consensus disorder prediction 1364 1385 - -
Glsi08g1706 1594 Coils Coil 1053 1087 - -
Glsi08g1706 1594 FunFam Myosin heavy chain 330 384 - -
Glsi08g1706 1594 ProSiteProfiles Dilute domain profile. 1240 1539 IPR002710 -
Glsi08g1706 1594 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 862 IPR027417 -
Glsi08g1706 1594 ProSiteProfiles IQ motif profile. 932 961 IPR000048 GO:0005515
Glsi08g1706 1594 CDD MYSc_Myo11 154 798 IPR036018 -
Glsi08g1706 1594 ProSiteProfiles Myosin motor domain profile. 140 810 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi08g1706 1594 Gene3D Kinesin motor domain 143 740 IPR036961 -
Glsi08g1706 1594 SMART DIL_2 1414 1521 IPR002710 -
Glsi08g1706 1594 Gene3D - 330 387 - -
Glsi08g1706 1594 PANTHER MYOSIN 132 1528 - -
Glsi08g1706 1594 Gene3D - 745 811 - -
Glsi08g1706 1594 SMART iq_5 883 905 IPR000048 GO:0005515
Glsi08g1706 1594 SMART iq_5 812 834 IPR000048 GO:0005515
Glsi08g1706 1594 SMART iq_5 931 953 IPR000048 GO:0005515
Glsi08g1706 1594 SMART iq_5 908 930 IPR000048 GO:0005515
Glsi08g1706 1594 SMART iq_5 860 882 IPR000048 GO:0005515
Glsi08g1706 1594 SMART iq_5 835 857 IPR000048 GO:0005515
Glsi08g1706 1594 Coils Coil 1029 1049 - -
Glsi08g1706 1594 Gene3D - 812 861 - -
Glsi08g1706 1594 Gene3D - 910 960 - -
Glsi08g1706 1594 Gene3D - 862 909 - -
Glsi08g1706 1594 PRINTS Myosin heavy chain signature 559 587 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi08g1706 1594 PRINTS Myosin heavy chain signature 170 189 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi08g1706 1594 PRINTS Myosin heavy chain signature 506 534 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi08g1706 1594 PRINTS Myosin heavy chain signature 274 301 IPR001609 GO:0003774|GO:0005524|GO:0016459
Glsi08g1706 1594 PRINTS Myosin heavy chain signature 227 252 IPR001609 GO:0003774|GO:0005524|GO:0016459
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1706 Glsi-ChrGlsi08 12138592 12166874 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1706 82 1592 Myosins gene family AT4G33200 74.356 0.0 2312