Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1699 ATGCTTGAGATGTACCAACATCCAATTCATTTGGTGCTAAAATTTGTAGGAAAGAGTCAGTTCATACTTCAGACACATTATTCCCTCTTGTCATCGTCCCTTGCAGCTTGTCTCAGAAGAGGTCAAAAGCCTGTAGCGAAGATGATGCACATGACCTTCTACTGGAGCATAAAAGTGACTCTCCTGATCGACTCCTGGAAGACCGATTCATGGATCAGTTACGCCCTCAGTTTACTTGCCTGCGTCCTCGTCTCGGCTTTCTACCAGTATCTGGAGAATCGCCGTATTCGCCTAAAGCTCATCTCCTCCCAAAAGCCATCCCCTTCGCCGCAGATCCAAACCCCTCTTCTGCAATCGGTGGTCGTAGGAGAAAAAGCGAAGGTCGGAGTGAAGCTCGCCGGAGCGATTCTGTTTGGGGTGAACTCGGCGATCGGGTATTTGCTGATGTTGGCCATCATGTCGTTTAACGGAGGGGTCTTTATTGCGATCGTGGTGGGTCTTACCATCGGATACTTCTTCTTCAGGAGTGAGGGGGAAGATGTTTCGCTTGTCGTCGACAATTCCTGTGCCTGTGCTTAG 579 0.494 MLEMYQHPIHLVLKFVGKSQFILQTHYSLLSSSLAACLRRGQKPVAKMMHMTFYWSIKVTLLIDSWKTDSWISYALSLLACVLVSAFYQYLENRRIRLKLISSQKPSPSPQIQTPLLQSVVVGEKAKVGVKLAGAILFGVNSAIGYLLMLAIMSFNGGVFIAIVVGLTIGYFFFRSEGEDVSLVVDNSCACA 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1699 192 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 46 181 IPR007274 GO:0005375|GO:0016020|GO:0035434
Glsi08g1699 192 Pfam Ctr copper transporter family 51 174 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1699 Glsi-ChrGlsi08 12105849 12106601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1699 48 192 Inorganic Solute Cotransporters AT5G20650 57.534 2.68e-57 175
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1699 08 12105849 12106601 Glsi07g0553 07 4908869 4910759 ECH
Glsi08g1699 08 12105849 12106601 Glsi08g1699 08 12105849 12106601 ECH