Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1695 ATGGGTGGTGGTAGAGTTGAAGTGATAAGTAGTAAGGGCTGTTCTGGACTGTTTTCATCTTCATTGCCTTCATTCAGGGGTTTACAACCGTTGGAGCCAATGACTCCGATTTCGTCCTCTGTCGGTTCTGAACTTGTGGAGGTGCGATCAAGTGCTCCTTTTGCTGGTCTCGTTATATGCGTTACTGGTCTATCTAAGGAAGCAAGGAAACAGGTCATGGAGGCTACAGAGAGACTAGGTGGCCAATATAGCCCCAATTTGCATCCTCAATGTACCCATTTGGTGTTTGAGCATGCACTAAAGCACGGAGCAAGAAATGGTCTCTTTGTTGTTACATTGGGTTGGTTTGTGGATAGTGTTAGGAAAAATGTGAGGTTGAGTGAATCACTTTACAGTGTGAAGAATTATGGGGATAACAATATGCGCATGGATGATTTTAAAATGCTTGCTGGGTATACAAGTGCTGAAAATTCTTGTCTTCCTGCAAAAATTCATGAAAAATTTAATATAGCTGAAGAGTTTCAAAGATTTTCTGAGAGAGATTCTAGCAAGAATGTGGACTTGACTTTATCTGGTTGCTCTATCTATGTTGATCCAGACATCTCATTTGAATTGCGCAATAAGGTTGTTGAGACTGCATCCAAAGAAGGTGCCAGTTTGGTGAAACAGTGGTTTGTTGGTTGCAATGCTAGTCATGTAGTCACTGAAGGCACATCCATCAGAAGATATCTTGGATACTCTAGCAACTTCATTACACCACTGTGGATTCTGAAAACAGCTAAGGAGAAACATGTGCAAAGGCTTGTTCACATGTCTGCTGATTTGGCCAGGCAAGTTGGTTTGATGCTTGATGACATTCATAATGGCATTGCGGGGGAGGAATCTCTTAAGCAAGATCTCCCTGAAGATCTTCAGGGCCTTAAAAGTAAAGTCAGTCACAAAAAAAGGCAACAGATTGTGAATTCTGCAAAAATTGGTGTCAGAAATCGTCGTGGTCGTCAAATGCAGGCAATCTTATGGTTAAGATGCTGTAACTTTAAGTTTGTAGCTGTTACCCTTTTACAAGGAGTTGGCAGAAGGTGGTGGGGTTTGGGAGGTTATGCCTTTTTACATGATTCATGCTAA 1125 0.4169 MGGGRVEVISSKGCSGLFSSSLPSFRGLQPLEPMTPISSSVGSELVEVRSSAPFAGLVICVTGLSKEARKQVMEATERLGGQYSPNLHPQCTHLVFEHALKHGARNGLFVVTLGWFVDSVRKNVRLSESLYSVKNYGDNNMRMDDFKMLAGYTSAENSCLPAKIHEKFNIAEEFQRFSERDSSKNVDLTLSGCSIYVDPDISFELRNKVVETASKEGASLVKQWFVGCNASHVVTEGTSIRRYLGYSSNFITPLWILKTAKEKHVQRLVHMSADLARQVGLMLDDIHNGIAGEESLKQDLPEDLQGLKSKVSHKKRQQIVNSAKIGVRNRRGRQMQAILWLRCCNFKFVAVTLLQGVGRRWWGLGGYAFLHDSC 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1695 374 Pfam twin BRCT domain 57 100 IPR001357 -
Glsi08g1695 374 ProSiteProfiles BRCT domain profile. 185 263 IPR001357 -
Glsi08g1695 374 ProSiteProfiles BRCT domain profile. 49 133 IPR001357 -
Glsi08g1695 374 Gene3D BRCT domain 52 135 IPR036420 -
Glsi08g1695 374 SMART BRCT_7 51 123 IPR001357 -
Glsi08g1695 374 SMART BRCT_7 187 263 IPR001357 -
Glsi08g1695 374 PANTHER BRCT DOMAIN DNA REPAIR PROTEIN-RELATED 3 337 - -
Glsi08g1695 374 CDD BRCT_TopBP1_rpt2_like 53 123 - -
Glsi08g1695 374 SUPERFAMILY BRCT domain 56 142 IPR036420 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1695 53 133 Core DNA Replication Machinery Family AT1G77320 38.372 7.28e-09 55.8