Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1692 ATGGTGAAATCAGCCATGGCGTCTCCTAATTCTGACACTGCTCAGATCGGAACCGACTCTTTCAAGTATAAAGGAGTGAGGAAGCGAAAATGGGGCAAATGGGTATCTGAAATCAGGCTTCCCAACTGCCGTGATCGCATATGGTTAGGCTCTTACGACTCGCCGGAGAAAGCTGCTCGGGCCTTCGACGCAGCCCTTTACTATCTACGTGGTCGTCATGCCAATTTCAATTTCCCTGACACCCCTTTGCAGATTCATGTTGCTGCTGATCATCATGATCACCAGTCTCCTACTCCTCAGGAAATTCAAGTGCTTGCTGCTAGGTTTGCAAACCACCACCACCACCAGGTCCCACCCCACGAAGATTTTTCAGAACGTGGTGCTTCATTACATCCCGATAGGGTAACACTGACAGAGACAGCTTCTACAAGTTGTACCTCATCGTTGTCTATGTATAATGATATTGATGGCACTTTGCAATTGGACCACGAGGACACGATAGATTGGTCATTCTTGAACTTGTTGGATGCCAATGAGGTTGGCTCCGATTATGCCCTCTATTCTGGCCTACACAACGTGCACTCTGGTGACTTCGAGCTATATCCCACACCACCAGTAACTTTCGAGCTCAATGCGGAAGGCAACGAAAGTGATGATGCTATATCATTGCTTTGGAACTTTGGATACGAGTGGCTATAG 699 0.4764 MVKSAMASPNSDTAQIGTDSFKYKGVRKRKWGKWVSEIRLPNCRDRIWLGSYDSPEKAARAFDAALYYLRGRHANFNFPDTPLQIHVAADHHDHQSPTPQEIQVLAARFANHHHHQVPPHEDFSERGASLHPDRVTLTETASTSCTSSLSMYNDIDGTLQLDHEDTIDWSFLNLLDANEVGSDYALYSGLHNVHSGDFELYPTPPVTFELNAEGNESDDAISLLWNFGYEWL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1692 232 FunFam Ethylene-responsive transcription factor 2 22 80 - -
Glsi08g1692 232 Gene3D AP2/ERF domain 22 80 IPR036955 GO:0003700|GO:0006355
Glsi08g1692 232 Pfam AP2 domain 22 71 IPR001471 GO:0003700|GO:0006355
Glsi08g1692 232 PRINTS Ethylene responsive element binding protein signature 23 34 IPR001471 GO:0003700|GO:0006355
Glsi08g1692 232 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Glsi08g1692 232 SMART rav1_2 22 85 IPR001471 GO:0003700|GO:0006355
Glsi08g1692 232 CDD AP2 22 81 IPR001471 GO:0003700|GO:0006355
Glsi08g1692 232 ProSiteProfiles AP2/ERF domain profile. 22 79 IPR001471 GO:0003700|GO:0006355
Glsi08g1692 232 SUPERFAMILY DNA-binding domain 22 80 IPR016177 GO:0003677
Glsi08g1692 232 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1692 Glsi-ChrGlsi08 12063659 12064357 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1692 1 189 AP2-EREBP Transcription Factor Family AT1G74930 45.596 6.44e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi08g1692 AP2 3.2e-12 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1692 08 12063659 12064357 Glsi08g1692 08 12063659 12064357 ECH