Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1677 ATGATAACTTGGAAGCTTTGGCACGCAAGAACAAGCTATACATACGCAATACTACTTTTGTTTCTTCATTTTCTTATATTGGCCTGGGAAATATTATCTGGGAACCCTGAATATTCAAGCTATAATATGGGCTATCTCAATTCAGTTTTGTCCTCTTCAAGCCAGGTTCATGCTGCTGAAGATGCACCTGTGAGCGGCGGAGGCCTCAGTCAGAATGGTAAGTTCAGTTATGGATATGCCAGCTCTCCTGGCAAGAGATCTTCAATGGAAGATTTTTATGAGACAAGAATTGATGGTGTTGATGGTGAAATTGTTGGGCTTTTTGGAGTTTTTGATGGTCATGGTGGTGCACGGGCTGCCGAGTATGTTAAACAAAACCTCTTCAGTAATTTGATCAGACACCCAAAGTTTATTTCTGACACCAAATCAGCTATTGCTGATGCATATAGCCATACCGACTCTGAATTTCTCAAATCTGAAAATAATCAAAACAGAGATGCTGGATCAACTGCTTCCACTGCCATCCTAGTTGGTGACCGTTTGCTTGTTGCAAATGTTGGGGACTCCAGAGCTGTCATTTGCAGGGGTGGTAATGCCATTGCTGTTTCTCGAGACCATAAGCCAGACCAAACTGATGAGAGGCAAAGGATTGAAGATGCGGGGGGCTTTGTTATGTGGGCTGGAACATGGAGAGTTGGTGGTGTTCTTGCTGTTTCTCGTGCATTTGGTGATAGACTTCTCAAGCAGTATGTTGTTGCTGATCCAGAAATCCAGGAAGAAAAAATTGACAGCTCTCTTGAGTTTCTTATATTGGCCAGTGATGGGCTATGGGATGTTGTCTCTAATGAGGAAGCTGTTGCTATGATAAAACCAATTGGGGATGCAGAGGAGGCAGCAAAGAGGCTGATGCATGAAGCATATCAGAGAGGTAGTTCTGACAATATCACTTGTGTTGTTGTTCGTTTCTTGATGAACCATGGCGCATCTTCCCGTAGTAGCTCACGTCCTTCGGTAGAAGCGTAG 1023 0.436 MITWKLWHARTSYTYAILLLFLHFLILAWEILSGNPEYSSYNMGYLNSVLSSSSQVHAAEDAPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGVDGEIVGLFGVFDGHGGARAAEYVKQNLFSNLIRHPKFISDTKSAIADAYSHTDSEFLKSENNQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGNAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVSNEEAVAMIKPIGDAEEAAKRLMHEAYQRGSSDNITCVVVRFLMNHGASSRSSSRPSVEA 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1677 340 Pfam Protein phosphatase 2C 105 315 IPR001932 -
Glsi08g1677 340 SUPERFAMILY PP2C-like 70 322 IPR036457 -
Glsi08g1677 340 SMART PP2C_SIG_2 87 322 IPR001932 -
Glsi08g1677 340 SMART PP2C_4 66 320 IPR001932 -
Glsi08g1677 340 CDD PP2Cc 75 322 IPR001932 -
Glsi08g1677 340 ProSitePatterns PPM-type phosphatase domain signature. 107 115 IPR000222 GO:0043169
Glsi08g1677 340 PANTHER PROTEIN PHOSPHATASE 63 321 IPR015655 GO:0004722|GO:0006470
Glsi08g1677 340 Gene3D - 68 326 IPR036457 -
Glsi08g1677 340 FunFam probable protein phosphatase 2C 59 68 326 - -
Glsi08g1677 340 ProSiteProfiles PPM-type phosphatase domain profile. 76 322 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1677 Glsi-ChrGlsi08 11970895 11976912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1677 43 334 PP2C-type Phosphatase Gene Family AT4G31750 90.411 0.0 535