Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1664 ATGAGATTTTGCTCTGATCTTCGACTCTGCGAGCGAGGTCCTGCTGGGCAAACAGGAATGGGGACTTATCTTAGCACTCCCAAAACTGAGAAGTTTTCTGAAGATGGTGAAAATGACCGACTTAGATATGGTTTATCATCCATGCAAGGGTGGCGTGCAACAATGGAAGATGCTCATGCTGCATATCCTGATCTGGATGCGTCCACTTCATTTTTTGGTGTTTATGATGGACATGGAGGGAAGGTAGTTGCAAAGTTTTGTGCCAAGTATCTTCACCAACAGGTGCTCAAGAGTCAAGCATATGCAGCTGGAGATATAGTAACCTCTCTTCAGAAAGCCTTTTTCAGAATGGACGAGATGATGCATGGTCAAAGGGGATGGAGGGAATTAGCAGTCTTGGGGGATAAGATAAACAAGTTTACTGGGATGATAGAAGGTTTGATTTGGTCTCCAAGAAGCAGTGACAACAATAATCAAGTTGATGATTGGCCTTTTGAGGAGGGGCCTCATTCTGATTTTGCTGGACCAACTTCAGGAAGCACTGCCTGTGTTGCAATTATTAGAAACAAACAACTAGTTGTTGGGAATGCTGGCGATTCACGATGTGTGATATCTAGGAAGGGTCAGGCATACAACTTGTCTAGAGATCACAAACCCGATCTTGAGATTGAGAAGGAAAGAATTTTAAAAGCTGGTGGTTTTATTCACGCGGGAAGAGTTAATGGCAGTTTAAATCTTGCAAGGGCTATAGGTGACATGGAATTTAAACAGAATAAATTTCTACCTGCTGAAAAACAAATTGTGACTGCAAATCCTGATATAAACACTGTTGACCTTTGCGATGATGACGAATTTATAGTGCTGGCGTGTGATGGGATATGGGATTGCATGTCAAGCCAGCAATTGGTAGATTTTGTGCATGAACAACTGATGTCGGAAACTAAACTTTCTGCGGTGTGTGAAAGAGTACTTGATCGGTGTTTGGCACCCTCAACTGCGGGTGGTGAGGGCTGTGATAACATGACCATGATCTTGGTGCAGTTCAAGAATCCCACCCACTCCAAAGGCTGA 1071 0.4342 MRFCSDLRLCERGPAGQTGMGTYLSTPKTEKFSEDGENDRLRYGLSSMQGWRATMEDAHAAYPDLDASTSFFGVYDGHGGKVVAKFCAKYLHQQVLKSQAYAAGDIVTSLQKAFFRMDEMMHGQRGWRELAVLGDKINKFTGMIEGLIWSPRSSDNNNQVDDWPFEEGPHSDFAGPTSGSTACVAIIRNKQLVVGNAGDSRCVISRKGQAYNLSRDHKPDLEIEKERILKAGGFIHAGRVNGSLNLARAIGDMEFKQNKFLPAEKQIVTANPDINTVDLCDDDEFIVLACDGIWDCMSSQQLVDFVHEQLMSETKLSAVCERVLDRCLAPSTAGGEGCDNMTMILVQFKNPTHSKG 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1664 356 Gene3D - 19 349 IPR036457 -
Glsi08g1664 356 SUPERFAMILY PP2C-like 22 351 IPR036457 -
Glsi08g1664 356 PANTHER PROTEIN PHOSPHATASE 2C 33 347 IPR015655 GO:0004722|GO:0006470
Glsi08g1664 356 ProSiteProfiles PPM-type phosphatase domain profile. 42 348 IPR001932 -
Glsi08g1664 356 SMART PP2C_SIG_2 47 348 IPR001932 -
Glsi08g1664 356 Pfam Protein phosphatase 2C 174 332 IPR001932 -
Glsi08g1664 356 Pfam Protein phosphatase 2C 42 121 IPR001932 -
Glsi08g1664 356 ProSitePatterns PPM-type phosphatase domain signature. 71 79 IPR000222 GO:0043169
Glsi08g1664 356 SMART PP2C_4 32 346 IPR001932 -
Glsi08g1664 356 CDD PP2Cc 42 348 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1664 Glsi-ChrGlsi08 11855354 11860622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1664 20 355 PP2C-type Phosphatase Gene Family AT2G25070 81.548 0.0 600