Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1656 ATGTTTAGATGGGCTTTGTGTCGGGAAGCAGATGTGCAGTACATCACGTCAGCGTCAGCACTGACAGAAAATCTATTTACCTCCTTCACGCCCATTCGTCTATCTCTCAATATTCTTTTCCGTAGCGCAATGGAGGATTCAACTTGCGTGGATACTTCTCTCAACCTCAAGTTTACTGCTGATCACCAGTCTGAGACTTTGGTAGAACAGTTGCATCGTTTAAGTAGGGAGAACAAGAGGCTAACCCAGTCACTGACCCACATGTGTGAGAACTACAATGTTTTGCAAAAGCATTTGAGCCAGCTGATCAACACTTCTGAAGATACAACACAATCAAGGAAAAGAAAGGCCCAGACTTGTACCAATAATATGTTTGAGTGCAGCACCATTCCTGATCACAAGCAAGAATCATTCAAAAGGCCCAAGGAAAACACTACCGCTAAGGTTTTCAGGGTTCTTGTGCCGACCCAAACATCTGATCCTAGCTTATATGTGAGGGATGGGTATCAATGGAGGAAATATGGTCAGAAGGTTACCAGAGATAACCCCTCTCCCAGGGCTTACTTCAAGTGCTCCTTTGCCCCAAGCTGCCCAGTCAAAAAGAAGGTGCAAAGAAGCGCAGAAGACCCAACTGTTTTGGTGGCAACGTACGAAGGGGAGCACAACCATAAGCATCATGGATCCGAATTATCGGTGGGGTCAAGCCAAAGTGAAGATCACCTTGGTTCGGTGGGTGTTTTGTCGTCGCCCATGAATGGAAGTGCTGGCCCGAATAAAACGCTTGATCTGGTGGGTTCAAGATTGGTTGTGGACAATGCTGAAAATTCTTTGAAGCAGTTTTTAATTCAACAAATGGCTACTTCTTTGACGAGAGATCCGAATTTTACAGAAGCACTTGCTGCTGCCATTTCCGGAAAAATTTTAGACCATAATGCTAAGGAAAAACGGTACTGA 954 0.4486 MFRWALCREADVQYITSASALTENLFTSFTPIRLSLNILFRSAMEDSTCVDTSLNLKFTADHQSETLVEQLHRLSRENKRLTQSLTHMCENYNVLQKHLSQLINTSEDTTQSRKRKAQTCTNNMFECSTIPDHKQESFKRPKENTTAKVFRVLVPTQTSDPSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSAEDPTVLVATYEGEHNHKHHGSELSVGSSQSEDHLGSVGVLSSPMNGSAGPNKTLDLVGSRLVVDNAENSLKQFLIQQMATSLTRDPNFTEALAAAISGKILDHNAKEKRY 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1656 317 Gene3D WRKY domain 150 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g1656 317 MobiDBLite consensus disorder prediction 229 253 - -
Glsi08g1656 317 ProSiteProfiles WRKY domain profile. 167 226 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g1656 317 Pfam WRKY DNA -binding domain 167 224 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g1656 317 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 56 308 IPR044810 GO:0003700
Glsi08g1656 317 FunFam WRKY transcription factor 40 150 227 - -
Glsi08g1656 317 SMART WRKY_cls 165 225 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g1656 317 MobiDBLite consensus disorder prediction 220 253 - -
Glsi08g1656 317 Coils Coil 64 84 - -
Glsi08g1656 317 SUPERFAMILY WRKY DNA-binding domain 162 225 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1656 Glsi-ChrGlsi08 11804769 11808739 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1656 47 315 WRKY Transcription Factor Family AT1G80840 44.147 1.88e-73 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi08g1656 WRKY 1.1e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0637 10 4006301 4007706 Glsi08g1656 08 11804769 11808739 CCT