Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1644 ATGACTACAACACATGAAAATCATGTTAGCCCTAACACTATAGTTTCCCTTTTGAGGGTTGTGCCTGTGTATCCCAAGCTTCCGCAGCCCTTCAGGGTTTTAAACCTTTCAAATTTAGATAGGCAGTGCCCTACGCTTATGTACCTGGTGTTCTTTTATCGCCCGTATCAGGCGGATTTGTCCCTCAATTCAGTTTTCACCAGCTTGAAGTCTGGGTTGGAAGAGACCTTGAGCGTGTGGTACCCGGCTGCTGGTAGGCTGAGGCCCAACCAAAGTGATAGCAAGCTCAACCTCTGGTGCAACAACGATGGTGCAATTCTAGTGGAGGCAGAGACCCCTCTTCGAGTCTCGCAACTTGGGGACCTCTCTCACTACAATGATTTCTTTGAGAAGCTGGTTCACAAGCCTGCTTTTAATGGCAATTTCTCAAACATGCCTCTGATTGTTGCTCAGGTGACAAAATTTGGTTGTGGAGGGTATTCAGTTGGTATTGGGACAAGCCACTCGTTATTTGACGGACCAGCAACTTATGATTTCTTGTGTGCATGGGCTTCTAATTCTGAAATTGTGAAAGGAACGAGGTCTGTTGAGGCGCCAATTAATATTAAGCCAGTACATGAAAGAGGGATACTACTAAGTGCTAATTTGCCTTCAAACTCCAGTCTCAATCACCACACAAAGGCTGTAGCAATAGATCATCTATATCAACTCATAATGCAAGCAAGTAGTCACCCCATAGGGTTTCCCTCCCAACCAAACAACTTTGTTCTTAAGACCTATCATCTCAGCGGTGCACTGATAGATTACTTGAAGAGGAAACACTTTTCTATGAGCACAGATTCCTTTCCCGTCTCCACCTTCGAGGTTCTTGCAGCTCACCTTTGGAAGGCAAGGACCAAAGCTATGGGACTGAGGAAAGAAAAGATGGTATGCTTGCAGTTCGCTGTGGACACCAGGAACAAGATGGTGCCCCCATTACCAAAAGGTTTCAGCGGCAATGCTTATGTTCTTGCCTCTGTTATGATGTCGGTGGGAAAACTGGAAGAGGTAAGTCATTTAGGCCTCGTTCAGAAAGTAAGAGAAGCCAAGAACGCTGTAAACCAGGCGTATGTGAAAGCCTACGTTGAGGCACTGGATGGTCCACAGGGTTCCCTCCCTCCTTTGAAGGAGCTAACTTTGGTTTCAGATTGGACAAGGATGCCCTTCCATAATGTGGGCTTCTTCCATGCAAAAGCAGCCTATGCATCTCCTCTGGCCTCTCCAATTCCGCAGGTTGCATACTTCATGCAGAGTCCTACTGACAAAGGGGGCGTTGATGTCAGAATTGGCTTGCACCCAGAAGCCATAAGTGCTTTTACTGACTACTTTTTAGTCAAAGGGCACTAA 1386 0.4632 MTTTHENHVSPNTIVSLLRVVPVYPKLPQPFRVLNLSNLDRQCPTLMYLVFFYRPYQADLSLNSVFTSLKSGLEETLSVWYPAAGRLRPNQSDSKLNLWCNNDGAILVEAETPLRVSQLGDLSHYNDFFEKLVHKPAFNGNFSNMPLIVAQVTKFGCGGYSVGIGTSHSLFDGPATYDFLCAWASNSEIVKGTRSVEAPINIKPVHERGILLSANLPSNSSLNHHTKAVAIDHLYQLIMQASSHPIGFPSQPNNFVLKTYHLSGALIDYLKRKHFSMSTDSFPVSTFEVLAAHLWKARTKAMGLRKEKMVCLQFAVDTRNKMVPPLPKGFSGNAYVLASVMMSVGKLEEVSHLGLVQKVREAKNAVNQAYVKAYVEALDGPQGSLPPLKELTLVSDWTRMPFHNVGFFHAKAAYASPLASPIPQVAYFMQSPTDKGGVDVRIGLHPEAISAFTDYFLVKGH 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1644 461 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 20 424 - -
Glsi08g1644 461 Gene3D - 238 457 IPR023213 -
Glsi08g1644 461 Gene3D - 14 227 IPR023213 -
Glsi08g1644 461 Pfam Transferase family 23 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1644 Glsi-ChrGlsi08 11655759 11657995 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1644 23 457 Monolignol Biosynthesis Gene Families AT5G48930 25.503 3.90e-37 139