Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1634 ATGGAAACCCAGATATTTTCTTTTCTCCAACGTAGAGACGGACGAAAAGACAACGTAAATTCCAATGAGCAATGGGAAGTAGACGAACTCGGACTTTCATTAGTATATACAGCAGTGCAGAAAAAGTGTCGCACAATCCTTACCTCTCCTTATATCGACATTGAAGAAACAACGAAGCTGCAGCTTGTTCTCATGCTTCTTATGCTGCTTCCTTTTCTTCAACAACTCATTTGGGTTAGTGTCGCAGCTGACCCTCTTGTTTCCCACACACCAGTTCCTGTTTCCTCACCTCAAGTCCCATCCATCTCTCCAAAATCAATGCCTGTTTTCTCCCCAGTTACTCATTCTCCTCTCTTCCATTTCAACCATATCAAATTTGAATTTCAAAGTATAGAGGTGGGGAACGAACAAAAACGGAGAGATTCACACAAGAAAATGGTAATAGCTCTCGTCGTAGCCAGCACTGCACTTGGTGCAGTCATTTTGTCCTTGTTATGCTTCTGGATTTATCATAACAGGAAGTATCCATCCAAATCCAATAGAAACAATGCCCAAAGCTCAGATGCTGAGAAAAGGCATGCGTTACCTCCATATTTTAGTAAATTCAGTTCTCTCAAGATGATGAAACTGCAGAATGAGGTGGATTTGTTAAGTAAAATTCGGCATCCCAATATAATTTCTTTGATGGGTTATAGCATTGATGGCGACACGAGGTTTATTGTATATGAATTGATGCAAAATGGATCCTTGGAAACTCAATTACATGGGCCTACCCATGGCTCAGCATTGACGTGGTCCATGAGGATGAAGATTGCTTTTGATACAGCAAGAGGATTAGAATATCTGCATGAAAACTGCAGCCCTCCGGTGATCCACAGAGATCTGAAATCATCTAATATTCTTTTAGACGCAGACTTTAATGCCAAGCTTTGTGATTTTGGTCTTGCCATAATTGATGGGTCCCAAAACAAGAATAACATAAAGCTCTCAGGCACCTTGGGCTATGGAGCACCGGAGTATGTTTTAGATGGTAAATTGACTCATAAAAGCGATGTATATGCTTTTGGAGTAGTGCTTCTAGAGCTTCTATTAGGTAGGAAGCCAGTGGAAAAACTAACCCCAGAACAGTGCCGATCGACTGTGACATGGGCCATGCCACAGCTCACCGACAGATCCAAGCTTCCAAACATTGTGGATCCTGTGATTAAGAATACTATGGATCCCAAGCATTTGTACCAGGTTGCTGCTGTAGCTGTGCTATGCGTGCAACCAGAACCAAGTTACCGCCCACTGATTACAGATGTTCTCCGCTCCCTCATACCTCTTGTTCCAGTTGAGCAAGGAGGAACACTCCGACTTCCACAACTCACACTCCGACCTCTTTCTCCAACTCATTGA 1398 0.4278 METQIFSFLQRRDGRKDNVNSNEQWEVDELGLSLVYTAVQKKCRTILTSPYIDIEETTKLQLVLMLLMLLPFLQQLIWVSVAADPLVSHTPVPVSSPQVPSISPKSMPVFSPVTHSPLFHFNHIKFEFQSIEVGNEQKRRDSHKKMVIALVVASTALGAVILSLLCFWIYHNRKYPSKSNRNNAQSSDAEKRHALPPYFSKFSSLKMMKLQNEVDLLSKIRHPNIISLMGYSIDGDTRFIVYELMQNGSLETQLHGPTHGSALTWSMRMKIAFDTARGLEYLHENCSPPVIHRDLKSSNILLDADFNAKLCDFGLAIIDGSQNKNNIKLSGTLGYGAPEYVLDGKLTHKSDVYAFGVVLLELLLGRKPVEKLTPEQCRSTVTWAMPQLTDRSKLPNIVDPVIKNTMDPKHLYQVAAVAVLCVQPEPSYRPLITDVLRSLIPLVPVEQGGTLRLPQLTLRPLSPTH 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1634 465 Pfam Protein kinase domain 205 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1634 465 PANTHER OS01G0750732 PROTEIN 210 443 - -
Glsi08g1634 465 SMART serkin_6 146 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1634 465 FunFam probable receptor-like protein kinase At1g80640 245 444 - -
Glsi08g1634 465 Gene3D Transferase(Phosphotransferase) domain 1 249 446 - -
Glsi08g1634 465 SUPERFAMILY Protein kinase-like (PK-like) 208 439 IPR011009 -
Glsi08g1634 465 ProSitePatterns Serine/Threonine protein kinases active-site signature. 290 302 IPR008271 GO:0004672|GO:0006468
Glsi08g1634 465 ProSiteProfiles Protein kinase domain profile. 146 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1634 465 Gene3D Phosphorylase Kinase; domain 1 190 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1634 Glsi-ChrGlsi08 11609034 11614125 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1634 209 443 Receptor kinase-like Gene Family AT3G58690 50.207 1.76e-78 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Glsi08g1634 PK_Tyr_Ser-Thr 3.5e-39 CL0016