Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1618 ATGTATACTGGTACTCCCGTGCCTAGTTTATATTTGGTTCACTTTCAAATTGGAAACTTTGTCAATTTTAGGCACTGGAATAAAGAAAGAGACGAACAAGGGCTGGAGAAAGCAACGGCATCACTGCAAATGGGTACTCTTCTGAAGTGCTACAGACCCTTCTTCTTAATGTTTCCCTACCCGGCTCGAACAATTCAACTCAGAACCAACCAAAATGCCTCCGCCGCCATTTTCCGGAGGAAGAAGCTGGGTTCGGTTACCCGTTGTTTTAGTGTCAGTTCTTTGGGTTCATCCCAGCCGTCGACTGCCGAACAGAGCTTCGGGAAATCCGACTGTGAGAGGGTCAAGAGTCCATCGCCAGAGCTGTGGCTGTACAACACGATGAGTAAAAGGAGGGAGCTTTTCAAACCTAAGGTGGAAGGGAAAGTTGGAATGTATGTCTGCGGAGTTACAGCATATGATCTTAGCCATATTGGACACGCTCGCGTCTACATCAATTTTGACGTTCTTTACAGATATCTTAAGCATTTGGAATTTGAAGTCTGTTATGTTCGCAATTTTACTGATGTAGATGACAAGATAATAACTAGAGCAAAGGAGTTAGGAGAGGATCCAATCAATTTGAGCCGGCGTTATTGTGAAGAGTTTAATCAAGACATGGGAACTCTTCATTGTCTACCTCCTTCTGTGGAACCACGAGTTTCGGATCACATTCCCCAAATCATTGATATGATTGAACAGATTATTAAAAATGGGTATGCCTACGTTGTTGATGGGGATGTATACTTTAACGTAGAAAAATTTCCAGAATATGGGCAGTTATCTGGACGTGATCTAGAAGATAATCGAGCTGGCGAGAGGGTTGCTGTTGATTCAAGGAAGAAAAATCCAGCTGATTTTGCTCTTTGGAAGTCTGCAAAGCAGGGAGAGCCATTTTGGGAGAGTCCCTGGGGTCCTGGAAGACCTGGGTGGCATATTGAATGCAGTGCTATGAGTGCAGCCTATCTCGGTTACTCTTTTGACATCCATGGTGGAGGGGTCGACCTTGTGTTTCCTCACCATGAAAATGAAATTGCTCAGAGTTGTGCTGCATGTAAGAAAAGTAATATAAGCCTTTGGATACACAATGGCTTTGTCACTGTTGACTCAGAAAAGATGTCCAAGTCTCTGGGTAACTTTTTCACAATACGGCAGGTTATAGATCTTTACCATCCACTGGCTTTGAGATACTTTTTGATGGGAGCCCATTATCGATCGCCAATTAACTACTCTCATATACAGCTTGAAAGTGCTTCAGATCGTATTTTCTATATATATGAGGCATTACATGAATGTGAAAGCTTTCTGCACCAACATGATGTAACAATCAGGAATGATTCCATCCCACCTGATACTTTGAATATCATTGATAAGTTCCATGATGTATTTGTGGCCTCAATGTCCGATGATCTTCACACCCCGGTTGTATTGGCTGCACTGTCTGATCCATTAAAAGCAATTAATGATCTGCTACATACTCGCAAGGGAAAGAAACAAAAACTGCAAGTAGAATCACTTTCAGCCTTGGAGAAGAGTATCAGGAATGTTCTAACTGTTTTAGGGCTTGTGCCTGCAAGTTATTCTGAGGTTTTGCAGCAGCTTAGGGAAAAAGCTTTAAAGCGTGCAAACTTGACAGAAGATGAAGTCTTGCAGAAAATTAAAGAACGGGATGCTGCTAGAATTAAAAAGGAGTACGAAAAATCAGATGCAATTAGGAATGATCTGGCTGTTTCTGGTATTACTCTTATGGACAGTCCGAATGGTACAACGTGGAGGCCCACCATTCCTCTTTTACTTCAAGAGCAGCAGATTGGTGCACCTTGA 1863 0.4246 MYTGTPVPSLYLVHFQIGNFVNFRHWNKERDEQGLEKATASLQMGTLLKCYRPFFLMFPYPARTIQLRTNQNASAAIFRRKKLGSVTRCFSVSSLGSSQPSTAEQSFGKSDCERVKSPSPELWLYNTMSKRRELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYINFDVLYRYLKHLEFEVCYVRNFTDVDDKIITRAKELGEDPINLSRRYCEEFNQDMGTLHCLPPSVEPRVSDHIPQIIDMIEQIIKNGYAYVVDGDVYFNVEKFPEYGQLSGRDLEDNRAGERVAVDSRKKNPADFALWKSAKQGEPFWESPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGVDLVFPHHENEIAQSCAACKKSNISLWIHNGFVTVDSEKMSKSLGNFFTIRQVIDLYHPLALRYFLMGAHYRSPINYSHIQLESASDRIFYIYEALHECESFLHQHDVTIRNDSIPPDTLNIIDKFHDVFVASMSDDLHTPVVLAALSDPLKAINDLLHTRKGKKQKLQVESLSALEKSIRNVLTVLGLVPASYSEVLQQLREKALKRANLTEDEVLQKIKERDAARIKKEYEKSDAIRNDLAVSGITLMDSPNGTTWRPTIPLLLQEQQIGAP 620
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1618 620 SMART dalr_2_4 475 544 IPR015273 GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423
Glsi08g1618 620 FunFam Cysteine--tRNA ligase 121 422 - -
Glsi08g1618 620 CDD CysRS_core 123 424 IPR032678 -
Glsi08g1618 620 Pfam tRNA synthetases class I (C) catalytic domain 135 431 IPR032678 -
Glsi08g1618 620 SUPERFAMILY Nucleotidylyl transferase 121 430 - -
Glsi08g1618 620 Gene3D HUPs 103 423 IPR014729 -
Glsi08g1618 620 Gene3D - 424 606 - -
Glsi08g1618 620 PANTHER CYSTEINYL-TRNA SYNTHETASE 116 615 IPR024909 -
Glsi08g1618 620 Pfam DALR domain 476 536 IPR015273 GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423
Glsi08g1618 620 Hamap Cysteine--tRNA ligase [cysS]. 122 607 IPR015803 GO:0004817|GO:0005524|GO:0006423
Glsi08g1618 620 MobiDBLite consensus disorder prediction 95 116 - -
Glsi08g1618 620 FunFam Cysteine--tRNA ligase CPS1, chloroplastic/mitochondrial 424 606 - -
Glsi08g1618 620 PRINTS Cysteinyl-tRNA synthetase signature 145 156 IPR024909 -
Glsi08g1618 620 PRINTS Cysteinyl-tRNA synthetase signature 310 328 IPR024909 -
Glsi08g1618 620 PRINTS Cysteinyl-tRNA synthetase signature 181 190 IPR024909 -
Glsi08g1618 620 PRINTS Cysteinyl-tRNA synthetase signature 341 362 IPR024909 -
Glsi08g1618 620 NCBIfam cysteine--tRNA ligase 122 605 IPR015803 GO:0004817|GO:0005524|GO:0006423
Glsi08g1618 620 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 461 606 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1618 Glsi-ChrGlsi08 11519934 11525447 Dispersed