LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi08g1606	ATGGTGGGTGATGATAACGGAAAACAGCAACGAGGGAGAACAGTGGAGTATAGGCCTATAGATATAGTACGAGAGCAGTTTGGGAGGGAAAACCAAAAAAAAAAAAAACCTCAAGCTTTTCTTCTTCAACAGGCTGATCATACAGAGAGAGAAAGCGAAAGAGATTGCTGCAACAAAATGTTTGCCGAAGAGTATGGTCTAAAGGGAGACCCGAGGCTGCAAGCCATCACCGAAGCCATAAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACGACATTGCTGTTGGATCACAAGGCATTTAAAGACACGGTCGACATTTTTGTCGATCGGTACAGAGACATGGACATTTCCGTAGTTGCCGGAGTGGAAGCTAGAGGATTTATGTTTGGTCCCCCAATTGCGTTGGGCATTGGTGCAAAGTTTGTTCCTTTACGCAAACCTCGAAAACTGCCGGGTGAAGTGATATCAGAAAAATATGTGCTGGAATATGGAACTGATTGTCTGGAGATGCATGTTGGCGCCGTGCAGCCCGGTGAACGGGCCTTAGTTATTGATGATTTGGTGGCCACAGGTGGTACTCTGTCAGCAGCAATAACCCTTCTAGAACGTGTCGGTGCTGAAGTAGTTGAGTGTGCCTGTGTAATTGGTGTGCCGGAGGTTAAGGGACACTGCAGGCTGAATGGAAAGCCACTGTACGTCCTTGTGGAGCCTCGTCAAATAGATAATAGTTTGAGATGTGATTTCAGTGCTGTTTCTGCTGACATACAAAAGGATGAGCCTTTGAGAAAACAGGCCTTAATATGCTCCTCTTACCAGTTTTCAGCTGATTGA	849	0.457	MVGDDNGKQQRGRTVEYRPIDIVREQFGRENQKKKKPQAFLLQQADHTERESERDCCNKMFAEEYGLKGDPRLQAITEAIRVVPHFPKQGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMDISVVAGVEARGFMFGPPIALGIGAKFVPLRKPRKLPGEVISEKYVLEYGTDCLEMHVGAVQPGERALVIDDLVATGGTLSAAITLLERVGAEVVECACVIGVPEVKGHCRLNGKPLYVLVEPRQIDNSLRCDFSAVSADIQKDEPLRKQALICSSYQFSAD	282

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi08g1606	282	PANTHER	ADENINE PHOSPHORIBOSYLTRANSFERASE	67	244	-	-
	Glsi08g1606	282	CDD	PRTases_typeI	110	242	IPR000836	-
	Glsi08g1606	282	Gene3D	-	65	243	IPR029057	-
	Glsi08g1606	282	Pfam	Phosphoribosyl transferase domain	115	225	IPR000836	-
	Glsi08g1606	282	Hamap	Adenine phosphoribosyltransferase [apt].	76	243	IPR005764	GO:0003999\|GO:0005737\|GO:0006168
	Glsi08g1606	282	SUPERFAMILY	PRTase-like	80	238	IPR029057	-
	Glsi08g1606	282	FunFam	Adenine phosphoribosyltransferase 1	64	243	-	-
	Glsi08g1606	282	NCBIfam	adenine phosphoribosyltransferase	77	241	IPR005764	GO:0003999\|GO:0005737\|GO:0006168

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi08g1606	Glsi-ChrGlsi08	11456409	11460104	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi08g1606	70	242	PRT Gene Family	AT1G27450	72.832	3.99e-91	266

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Glsi10g0686	10	4389982	4393855	Glsi08g1606	08	11456409	11460104	CCT
	Glsi08g1606	08	11456409	11460104	Glsi08g1606	08	11456409	11460104	ECH
	Glsi08g1606	08	11456409	11460104	Glsi10g0686	10	4389982	4393855	ECH

Showing 1 to 3 of 3 entries