Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1606 ATGGTGGGTGATGATAACGGAAAACAGCAACGAGGGAGAACAGTGGAGTATAGGCCTATAGATATAGTACGAGAGCAGTTTGGGAGGGAAAACCAAAAAAAAAAAAAACCTCAAGCTTTTCTTCTTCAACAGGCTGATCATACAGAGAGAGAAAGCGAAAGAGATTGCTGCAACAAAATGTTTGCCGAAGAGTATGGTCTAAAGGGAGACCCGAGGCTGCAAGCCATCACCGAAGCCATAAGAGTGGTGCCTCACTTCCCCAAACAAGGAATAATGTTTCAAGACATAACGACATTGCTGTTGGATCACAAGGCATTTAAAGACACGGTCGACATTTTTGTCGATCGGTACAGAGACATGGACATTTCCGTAGTTGCCGGAGTGGAAGCTAGAGGATTTATGTTTGGTCCCCCAATTGCGTTGGGCATTGGTGCAAAGTTTGTTCCTTTACGCAAACCTCGAAAACTGCCGGGTGAAGTGATATCAGAAAAATATGTGCTGGAATATGGAACTGATTGTCTGGAGATGCATGTTGGCGCCGTGCAGCCCGGTGAACGGGCCTTAGTTATTGATGATTTGGTGGCCACAGGTGGTACTCTGTCAGCAGCAATAACCCTTCTAGAACGTGTCGGTGCTGAAGTAGTTGAGTGTGCCTGTGTAATTGGTGTGCCGGAGGTTAAGGGACACTGCAGGCTGAATGGAAAGCCACTGTACGTCCTTGTGGAGCCTCGTCAAATAGATAATAGTTTGAGATGTGATTTCAGTGCTGTTTCTGCTGACATACAAAAGGATGAGCCTTTGAGAAAACAGGCCTTAATATGCTCCTCTTACCAGTTTTCAGCTGATTGA 849 0.457 MVGDDNGKQQRGRTVEYRPIDIVREQFGRENQKKKKPQAFLLQQADHTERESERDCCNKMFAEEYGLKGDPRLQAITEAIRVVPHFPKQGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMDISVVAGVEARGFMFGPPIALGIGAKFVPLRKPRKLPGEVISEKYVLEYGTDCLEMHVGAVQPGERALVIDDLVATGGTLSAAITLLERVGAEVVECACVIGVPEVKGHCRLNGKPLYVLVEPRQIDNSLRCDFSAVSADIQKDEPLRKQALICSSYQFSAD 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1606 282 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 67 244 - -
Glsi08g1606 282 CDD PRTases_typeI 110 242 IPR000836 -
Glsi08g1606 282 Gene3D - 65 243 IPR029057 -
Glsi08g1606 282 Pfam Phosphoribosyl transferase domain 115 225 IPR000836 -
Glsi08g1606 282 Hamap Adenine phosphoribosyltransferase [apt]. 76 243 IPR005764 GO:0003999|GO:0005737|GO:0006168
Glsi08g1606 282 SUPERFAMILY PRTase-like 80 238 IPR029057 -
Glsi08g1606 282 FunFam Adenine phosphoribosyltransferase 1 64 243 - -
Glsi08g1606 282 NCBIfam adenine phosphoribosyltransferase 77 241 IPR005764 GO:0003999|GO:0005737|GO:0006168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1606 Glsi-ChrGlsi08 11456409 11460104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1606 70 242 PRT Gene Family AT1G27450 72.832 3.99e-91 266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi10g0686 10 4389982 4393855 Glsi08g1606 08 11456409 11460104 CCT
Glsi08g1606 08 11456409 11460104 Glsi08g1606 08 11456409 11460104 ECH
Glsi08g1606 08 11456409 11460104 Glsi10g0686 10 4389982 4393855 ECH