Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1602 ATGGCTAAAGAAGTCATTGCTACTACACCAGCTGCGTCTTTTGAGTATGAACTCTTGGATGGTGATCCTGACCATATTAGAACTGTTAGAGCCGCATCCAGCCACACAAGTCCTTGGATTGAACCTGAAAGGTTGAAACTTAGACACAGAATTGGTAGGGGACCCTTTGGAGATGTTTGGTTAGCAACTCATCATGAGTCAACTGAAGATTATGATGAGTACCATGAAGTTGCTGCTAAGATGTTAGATCCAATCAGAGAGGATCATATGAGAATTGTATTGGAGATGTTCGATGAATTATATTTTAAGTGCCAAGGAGTGCTTGCAGTTTGCTGGCTACATGGAATTTCAATTCTAAACGGAAGGATATGCATCATCATGAAATTTTATGAGGGTTCAATTGGTGACAAAATGGCTAGACTCAGAGAAGGGAGGATTTTATTGCATGATGTTTTGAGGTATGGAATAAATTTGGCTCAAGGTATTTTGGAACTTCACTCTAAAGGAATTCTAATTCTCAACCTTAAACCATCCAATGTGCTTCTCAATGATAATGACCAAGCAGTTTTGGGAGATTTTGGTATTCCCAGTCTTCTTCTTGGCTCCTCATTCTTAAGCTCAGATATAGCTCACAGGCTTGGAACTCCAAATTACATGGCTCCAGAACAATGGCAACCAGAAGTCAGAGGCCCTATATCCTTTGAAACTGATTCATGGGGATTTGGGTGTACTATTGTGGAAATGTTGACTGGTAATCAACCTTGGTGTGGGCGATCTGTTGGTGAAATATACCAATCAGTTGTTAGAAAGCATGAAAAACCCCATGTTCCAGGTGGCCTTCCTTCTTCAGTTGAGAATATCCTCAATGGATGCTTTGAGTATGATTTAAGGAACCGTCCTTTAATGGTAGACATTCTCAGCATTTTTAAAAGCTCACTGAATGCACTAGCGAGTGATGAAGGATGGAGATCCCTTAGAACCATGAGGGTTGCTGTAAAATCAACTAGAACTGGCTACACAGAATGGTTCCTCTCGAAGGATCGCCTTCAAGTGGGTGACATGGTGCGATCTAGAAAACCGGCTCATTCCTACAAACCTCAAAACATGGATGTCCGAGAAGGAACTGTTGTTGGTTTAGAACGTACTGCAGATCATGGTTTTGTTTCAGTTAGGGTCCGTGGTATTCATGACCCTTTAAGGATTCATACTTCAACTCTTGAACGGGTCACATTTGGCTTGGCAACTGGTGATTGGGTGCGCTTGAAGGAAGAAGATGGGAAGCACTCTCCAGTCGGTATTCTGCATTCCATTAATCGTGACAGTAGAGTGGCTGTTGGATTTATCGGGATGCAAACTCTTTGGAAAGGAAATTCCTCAGAACTTGAAATGGCAGAATCTTATTATGAGGGCCAATTTGTTAGGCTGAAAGCCAATGTTTTGAGACCGCGCTTTGAATGGCCTCGGAAAAGGGGAGGGGCCTGGGCTAGTGGAAGGATTTCGTGGATCCTACCAAATGGGTGCCTGGTTGTCAAGTTCCCAGGACTGTTGACTTTTGGGGATGAATCAAACACCTTCTTGGGTGATCCAGCCGAAGTTGAAGTAGTTAATTTTAGGACTTGTCCAGGGATAATAGAGAAGTATCAACATGCAGAGGATCTTCACTGGGCAGTCAGACCTGTTCTAATTGTATTTGGCCTATTTACAGCTGTGAAACTAGGCATGTTAATTGGAAAGAAAATGGGGAAGAACATGAAGAAGGTCAATGCAATAGAGAGGGAAAGTGCCCGCTCCAGTGCTATAAATCCTGGCAGCACAGCATGGGTTCCTTCATCAGTTGCTAATATCCTTTTCCCTCCCACCGGTCGGTAA 1869 0.4296 MAKEVIATTPAASFEYELLDGDPDHIRTVRAASSHTSPWIEPERLKLRHRIGRGPFGDVWLATHHESTEDYDEYHEVAAKMLDPIREDHMRIVLEMFDELYFKCQGVLAVCWLHGISILNGRICIIMKFYEGSIGDKMARLREGRILLHDVLRYGINLAQGILELHSKGILILNLKPSNVLLNDNDQAVLGDFGIPSLLLGSSFLSSDIAHRLGTPNYMAPEQWQPEVRGPISFETDSWGFGCTIVEMLTGNQPWCGRSVGEIYQSVVRKHEKPHVPGGLPSSVENILNGCFEYDLRNRPLMVDILSIFKSSLNALASDEGWRSLRTMRVAVKSTRTGYTEWFLSKDRLQVGDMVRSRKPAHSYKPQNMDVREGTVVGLERTADHGFVSVRVRGIHDPLRIHTSTLERVTFGLATGDWVRLKEEDGKHSPVGILHSINRDSRVAVGFIGMQTLWKGNSSELEMAESYYEGQFVRLKANVLRPRFEWPRKRGGAWASGRISWILPNGCLVVKFPGLLTFGDESNTFLGDPAEVEVVNFRTCPGIIEKYQHAEDLHWAVRPVLIVFGLFTAVKLGMLIGKKMGKNMKKVNAIERESARSSAINPGSTAWVPSSVANILFPPTGR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1602 622 PANTHER OS06G0639500 PROTEIN 1 617 - -
Glsi08g1602 622 Gene3D Phosphorylase Kinase; domain 1 25 129 - -
Glsi08g1602 622 ProSiteProfiles Protein kinase domain profile. 45 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1602 622 Pfam Protein tyrosine and serine/threonine kinase 45 307 IPR001245 GO:0004672|GO:0006468
Glsi08g1602 622 CDD STKc_PknB_like 46 300 - -
Glsi08g1602 622 Gene3D Transferase(Phosphotransferase) domain 1 131 341 - -
Glsi08g1602 622 SUPERFAMILY Protein kinase-like (PK-like) 38 312 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1602 Glsi-ChrGlsi08 11446518 11448823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1602 36 311 MAP Kinase Kinase Kinase AT2G17700 25.000 9.24e-20 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-1 Glsi08g1602 PK_Tyr_Ser-Thr 5.9e-30 CL0016