Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1576 ATGCAGGAGCCAGCAACAAGTTCCATTGCTGCAAGCTCTCTGCCTTCAAGCAGTGAAAAATCTTCCAGTTCTGCTCTCCAGCTTGAAGTGACAGAAGGTCTTGAGAGTGACGAGGAGATCAGAAGAGTGCCGGAGATCGGTGTTGAATCCGCCGGAACGTCGGCCTCTCGTCCAGACACCGGCTCAGTCGCGGGCCCAGAACGGATTCAGGGGATAAGGGAGGGTCAAAGGAAGAGAGAGAGAAGCTCAGCTGACAAAGAAAGCAAGCGGCTTAAGAGGCTATTGAGGAACAGAGTTTCAGCACAGCAAGCGAGGGAGAGGAAAAAGGCATACTTGATTGATTTGGAAACAAGAGTTAAAGACTTTGAGAAGAAGAATTCAGAGCTCGAAGAGAGGCTGTCCACTTTGCAGAACGAGAATCAGATGCTAAGACATATATTGAAGAACACAACAGCAAGCAGGAGAGGAGGCACTGGTGCCGTTGCCAATGCTGATGGAACTTCATGA 507 0.497 MQEPATSSIAASSLPSSSEKSSSSALQLEVTEGLESDEEIRRVPEIGVESAGTSASRPDTGSVAGPERIQGIREGQRKRERSSADKESKRLKRLLRNRVSAQQARERKKAYLIDLETRVKDFEKKNSELEERLSTLQNENQMLRHILKNTTASRRGGTGAVANADGTS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1576 168 Coils Coil 112 146 - -
Glsi08g1576 168 MobiDBLite consensus disorder prediction 1 106 - -
Glsi08g1576 168 Pfam bZIP transcription factor 86 146 IPR004827 GO:0003700|GO:0006355
Glsi08g1576 168 MobiDBLite consensus disorder prediction 71 106 - -
Glsi08g1576 168 SUPERFAMILY Leucine zipper domain 89 147 IPR046347 GO:0003700|GO:0006355
Glsi08g1576 168 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 92 107 IPR004827 GO:0003700|GO:0006355
Glsi08g1576 168 Coils Coil 84 104 - -
Glsi08g1576 168 PANTHER TRANSCRIPTIONAL ACTIVATOR HAC1 5 158 IPR044280 GO:0000981|GO:0045944
Glsi08g1576 168 CDD bZIP_HY5-like 90 141 - -
Glsi08g1576 168 SMART brlzneu 85 149 IPR004827 GO:0003700|GO:0006355
Glsi08g1576 168 FunFam Transcription factor HY5 108 149 - -
Glsi08g1576 168 Gene3D Single helix bin 108 149 - -
Glsi08g1576 168 MobiDBLite consensus disorder prediction 1 30 - -
Glsi08g1576 168 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 87 150 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1576 Glsi-ChrGlsi08 11323317 11325838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1576 1 146 bZIP Transcription Factor Family AT5G11260 73.469 2.37e-54 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi08g1576 bZIP_1 3.8e-14 CL0018