Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1569 ATGGATGTGTCTATAGATGGTGATCCTATTGAAAGGATGGTTTTTGAGCTTTTCTATGATGTTGCACCCAAGACTGCTGAAAATTTCCGTGCACTATGTACAGGAGAGAGGGGAGTCAGTACAAGTACTGGAAAATCATTGCACTATAAGGGTTCTTTCTTCCATCACATTCTAAAAGGCTCCATTGTGCAGGGTGGTGATTTTGTCAATCGAAATGGGACTGGTGGAGAAAGCATATATGGTGTGAAGTTTCCTGATGAGTCGCCTAGGCTAAAGCATGATGCACCTGGCCTCCTATCCATGGCAATTGCAGATCGTGATACTCTTGGTTCTCATTTTATCATCACTTTGAAAGCTAATCACCATCTTGATAGGAAGCATGTAGTCTTTGGGAAGCTTGTTCAAGGTCATAATATATTGAAGAAAATTGAAGATGTGGGTGATGAAGAAGGGCATCCAACTGTAACGGTTAAAATCATTAATTGTGGTGAATACAATGAGGGTGGAAAGAAGATAAATAAGCTAAAAATAGGAAAAGATGGATCTTTTGAAGCCAATACTCAGGAAGTGCGGCGGAAGGATAAGCACAAGAAGTCTTCAAGAGACAGAAGGAAAAGGAGAAAAAGATACTACTCTTCTGGATCGGAAAGTTCCACAGATTCAGACATGGAATCTTCAGAAACTGATAGTGATTCTGACTCAGATGTGTCCTCATCATCTTACGTAAGTTCTTCCAGCGATGACAGGCGAAGGAAGAGAAAGAGATCTTCTAGGAAAGATAGGCATAGACGTGGAAAAAAAAGAGAGAAACGCCATGACAAGAAGCGGAGGAGACGAGATAAGAGATCGAAGCGTAAATTGAGAAGGGAATCGGGCAGTCTCACTGATTCTGATAGTGAGACTAGTATCGACAATAGCTCTGATAATGAAAATCTTGATGCACGAGGAAAAGAGCAGAAGCGGAAAGACCATTCCCAGAAGAATGCAGCTGGAGTTCAGTCTCCCTTAGTTGTGGAGAAAGAAGTACTTCCCATGCAGCATAAAAAGAGGGAGGAAGTTGGTATGCTAGAGGAAGAAGAATCCCCGAAGGTAAATGGAGAACGGCATAGTAATGGCATTGGAGCTCACTCTAGATCTGATGGAAGTGAAGAAAGGCAGCCTGACGTGATGGATGATCATCCAGGCAAATCTAGGAGTCGAAGCATGAGTCCTAAGAGGACCATGAGTAAAAGTATGAGTATTAGTCCCAGTAGGAATGAGAGCAAGAGCCCAAGTGTTAGCCCAACAAAGAGGTTGAGCAGAAGTCCAAGTGGTAGTAGAAGCCCTCCTCCATCAAGGAAGAGTTTCAGCAGGAGCCCAAGCAGAAGCATCAGCAGAAGCCCAGTGAGGGGCAGGAAGGGGAGAAGTGTCAGTAGGAGCCCTGTGAGAACTCATTCTCATAGAAGTGTAATTGAGAGCCCTATAAGATCCCTATCTCGAAGCCGCCGGAGCAGGAGTTCTCCCAGAGCATTATCACGAAGATCTATTAGCAGAAGCCCTGTAAGAGTTTCAAGAAAGAGTATAAGCAGGAGTCCAGTTAGATCATCTGCAAGAAGCATAAGCAGAAGCTCTGGAAAGGTCCCTTCGAGGAGAAGTATTAGCCGAAGTCCTGTGAGGGCACCAAGCAGAAGTAACCGCCGCAGTTATTCTCGGAGTCCTAGCCCCGTTCGTAGGGCAAGATCACCTCGTGGGAGGAGTTTGTCAAGGAGCGTTTCCCCTGATGCATCACCCAAGCGTATCAGAAGGGGAAGAGGATTCAGTGAGCGATATGCTTATGCAAGAAGGTACAGAACTCCATCTCGATCTCCTGTGAGGTTGTATCGGTACAATGGAAGAAGTGATCGCGACAGATACTCTAATTACCGAAGGTATTCCCCTCGGCGCTACAGGAGCCCGCCACCACGGGGAAGAACTCCTCCAAGGTACAGGAGCAGAAGAAGCAGGACACCCTCTGTATCACGCAGCCCTCGTTACCGTGCTCGACGTTATAGCCAAAGCCGTAGCCCGGTTCGCAGTCGTTCCCCAGTTGAGCCTTATCGATCTCGTACTTCTCCTGTAGAGAGGCGTTGGCCATCTCGGAGCAGGAGTCCCTCACAATCTAGGTCTCCTGTGGAGTCGCAGTCTCCACCAAATGCAAGCAGAGACAAGTCAAGGTCGTCATCCCGAAGCCCAAATGGAAAGAGGGGCTTGGTTTCGTATGGTGATGGTTCCCCTGATTCGGGCCAAAGGTGA 2271 0.4676 MDVSIDGDPIERMVFELFYDVAPKTAENFRALCTGERGVSTSTGKSLHYKGSFFHHILKGSIVQGGDFVNRNGTGGESIYGVKFPDESPRLKHDAPGLLSMAIADRDTLGSHFIITLKANHHLDRKHVVFGKLVQGHNILKKIEDVGDEEGHPTVTVKIINCGEYNEGGKKINKLKIGKDGSFEANTQEVRRKDKHKKSSRDRRKRRKRYYSSGSESSTDSDMESSETDSDSDSDVSSSSYVSSSSDDRRRKRKRSSRKDRHRRGKKREKRHDKKRRRRDKRSKRKLRRESGSLTDSDSETSIDNSSDNENLDARGKEQKRKDHSQKNAAGVQSPLVVEKEVLPMQHKKREEVGMLEEEESPKVNGERHSNGIGAHSRSDGSEERQPDVMDDHPGKSRSRSMSPKRTMSKSMSISPSRNESKSPSVSPTKRLSRSPSGSRSPPPSRKSFSRSPSRSISRSPVRGRKGRSVSRSPVRTHSHRSVIESPIRSLSRSRRSRSSPRALSRRSISRSPVRVSRKSISRSPVRSSARSISRSSGKVPSRRSISRSPVRAPSRSNRRSYSRSPSPVRRARSPRGRSLSRSVSPDASPKRIRRGRGFSERYAYARRYRTPSRSPVRLYRYNGRSDRDRYSNYRRYSPRRYRSPPPRGRTPPRYRSRRSRTPSVSRSPRYRARRYSQSRSPVRSRSPVEPYRSRTSPVERRWPSRSRSPSQSRSPVESQSPPNASRDKSRSSSRSPNGKRGLVSYGDGSPDSGQR 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1569 756 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 164 - -
Glsi08g1569 756 MobiDBLite consensus disorder prediction 503 568 - -
Glsi08g1569 756 SUPERFAMILY Cyclophilin-like 1 166 IPR029000 -
Glsi08g1569 756 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 125 140 IPR002130 GO:0000413|GO:0003755
Glsi08g1569 756 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 112 124 IPR002130 GO:0000413|GO:0003755
Glsi08g1569 756 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 17 32 IPR002130 GO:0000413|GO:0003755
Glsi08g1569 756 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 97 112 IPR002130 GO:0000413|GO:0003755
Glsi08g1569 756 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 54 66 IPR002130 GO:0000413|GO:0003755
Glsi08g1569 756 MobiDBLite consensus disorder prediction 703 740 - -
Glsi08g1569 756 MobiDBLite consensus disorder prediction 621 636 - -
Glsi08g1569 756 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 10 163 IPR002130 GO:0000413|GO:0003755
Glsi08g1569 756 MobiDBLite consensus disorder prediction 616 756 - -
Glsi08g1569 756 MobiDBLite consensus disorder prediction 251 286 - -
Glsi08g1569 756 MobiDBLite consensus disorder prediction 401 459 - -
Glsi08g1569 756 MobiDBLite consensus disorder prediction 310 327 - -
Glsi08g1569 756 MobiDBLite consensus disorder prediction 196 210 - -
Glsi08g1569 756 MobiDBLite consensus disorder prediction 461 475 - -
Glsi08g1569 756 MobiDBLite consensus disorder prediction 342 366 - -
Glsi08g1569 756 MobiDBLite consensus disorder prediction 184 599 - -
Glsi08g1569 756 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 172 - -
Glsi08g1569 756 Gene3D - 1 165 IPR029000 -
Glsi08g1569 756 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 1 164 IPR002130 GO:0000413|GO:0003755
Glsi08g1569 756 MobiDBLite consensus disorder prediction 378 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1569 Glsi-ChrGlsi08 11277975 11283662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1569 15 160 U-box Gene Family AT5G67530 40.541 1.31e-20 94.7