Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1506 ATGGAACTCCTCCCATCCTCCTCTCAGATAGCACAGCAAACTTGGGAGCTCGAGAATAACATCATCCCAATGGACACTCCCCCATCCACCGCAACCAACGCAGACCAAGCTTCCGACGCCATCTTCTACTACGACGAGGCCGCCCAGAACCAGTTCCAGAGGGAGAAACCATGGGTGAACGACCCCCATTACTTCAAGCGTGTTAAGATCTCTGCTCTTGCTCTTCTCAAGATGGTTGTCCACGCTCGTTCTGGTGGCACCATCGAGGTCATGGGTCTCATGCAAGGCAAGACCGACGGCGATGCCATCATCGTCATGGACGCCTTTGCTTTGCCTGTTGAAGGGACCGAGACTCGTGTTAATGCCCAAGCCGATGCCTATGAATACATGGTTGATTATTCTCAGACAAACAAGCAGGCAGGGCGTTTGGAAAATGTCGTTGGGTGGTATCATTCTCATCCTGGTTATGGATGCTGGCTTTCGGGTATTGACGTGTCCACGCAAATGCTAAATCAGCAATTTCAGGAGCCCTTTCTAGCTGTTGTTATTGACCCAACAAGGACGGTTTCTGCTGGAAAAGTTGATATTGGAGCATTCAGGACATACCCAGAGGGCTATAAGCCTCCGGACGAGCCTGTCTCTGAGTACCAAACCATCCCGCTAAATAAGATTGAAGACTTTGGTGTCCACTGTAAACAGTACTATGCGTTGGATATCACTTACTTTAAGTCTTCTCTTGATTCACATCTCTTGGATCTTCTCTGGAACAAATATTGGGTGAATACTCTATCATCTTCTCCTTTATTGGGTAATGGAGACTATGTGGCTGGACAAATCTCAGATCTAGCTGAAAAGTTAGAACAAGCAGAGAATCAGTTGGCACACCCACGCTTTGGGTCAATAATAGGTCCCCCTCAAAAAAAGAAAGGAGAAGACTGTCCACTTGCTAAGATTACTCGTGATAGTGCCAAAATAACTGTGGAGCAAGTACATGGTCTGATGTCACAGGTCATCAAGGACATCCTTTTCAACTCTACGCGTCAAGCAAACAGGTCTGGTGCTGAAGCATCTGGTCCTGAGCCAATGATTGAAAGCTGA 1098 0.4754 MELLPSSSQIAQQTWELENNIIPMDTPPSTATNADQASDAIFYYDEAAQNQFQREKPWVNDPHYFKRVKISALALLKMVVHARSGGTIEVMGLMQGKTDGDAIIVMDAFALPVEGTETRVNAQADAYEYMVDYSQTNKQAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQFQEPFLAVVIDPTRTVSAGKVDIGAFRTYPEGYKPPDEPVSEYQTIPLNKIEDFGVHCKQYYALDITYFKSSLDSHLLDLLWNKYWVNTLSSSPLLGNGDYVAGQISDLAEKLEQAENQLAHPRFGSIIGPPQKKKGEDCPLAKITRDSAKITVEQVHGLMSQVIKDILFNSTRQANRSGAEASGPEPMIES 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1506 365 FunFam COP9 signalosome complex subunit 5 5 270 - -
Glsi08g1506 365 ProSiteProfiles MPN domain profile. 68 205 IPR037518 -
Glsi08g1506 365 Pfam Cop9 signalosome subunit 5 C-terminal domain 264 344 IPR040961 -
Glsi08g1506 365 Gene3D Cytidine Deaminase, domain 2 4 270 - -
Glsi08g1506 365 CDD MPN_RPN11_CSN5 57 329 - -
Glsi08g1506 365 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 65 176 IPR000555 GO:0005515|GO:0008233|GO:0008237
Glsi08g1506 365 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED 59 352 - -
Glsi08g1506 365 SUPERFAMILY JAB1/MPN domain 67 204 - -
Glsi08g1506 365 SMART pad1_6 67 204 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1506 Glsi-ChrGlsi08 10914267 10918673 Dispersed/Wgd