Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1494 ATGGCGGTGGAGCTCATGGGATTCCCAAAAATGGATGAGCAGAAGGCAATACAGGAGGCTGCATCGGAGGGCTTGAAGGGCATGGAGCACATGATTCGTCTCCTCTCCCATCAACCCAATCAATTGGACTGCACTGATCTCACCGACGTTACCGTTTCTAAGTTCAAAAAACTCATTTCCCTTTTAAACCGAACCGGTCACGCCCGGTTCAGGCGAGCACCACTTCCGTCCTCTTCCTCTCCTTCTTCTTCTGCCTCGCCGCCGCCATCATCCGTAACCGCAACCGCAACCGCAACGCCCTCCCCCGTTTCGATTTCTCAATCGCAAGCTTTGAATCTATCTCCAGCACCGTTCGCCGCTCCGGCTCCAATCGTAAATCCAGTCGCCGTGCACCGCGCTCCTTCCAGTTTCGTTCCGGCTCAACCTCAGAGTCTGACCCTTGATTTTACAAAACCTAACATCTTAAGCTCCAACACCAAGTCCCTAGAGCTGGAGTTCTCGAAGGAAACCTTCAGCGTGTCCTCTAACTCATCGTTCATGTCGTCCGCCATCACCGGAGACGGAAGCGTTTCGAACGGCAAGCAAGGAACGTCGATCTTCTTGACCCCGGCGGCACCGACGGTTTCCGGTGGAAAGCCACCTCTGTCGACGGGGCCGGTCAAGAAAAGATGCCAGGACCACCGTGTTCAGTCGGACGACGTGTCCGGGTCCAGCAAGTGCCACTGCGTTAAGAGAAGGAAAAATCGAGTGAAGGAGACAGTAAGAGTGCCGGCGATAAGTACGAAGATAGCGGATATCCCACCGGACGAGTTCTCGTGGAGGAAGTACGGTCAGAAGCCAATCAAGGGATCACCGTACCCACGGGGGTATTACAAGTGCAGTACAGTGAGAGGGTGTCCGGCGAGGAAACACGTGGAGCGAGCCTCGGATGATCCGACGATGCTGATCGTGACGTACGAGGGGGAGCACCGTCATGCAGCTGAGAGCGCGATGCAGGAGAACGTGGCCGGGAGCGTGGGTTTGGTATTCGAGTCAACGCGAGGGAGTTAA 1050 0.5552 MAVELMGFPKMDEQKAIQEAASEGLKGMEHMIRLLSHQPNQLDCTDLTDVTVSKFKKLISLLNRTGHARFRRAPLPSSSSPSSSASPPPSSVTATATATPSPVSISQSQALNLSPAPFAAPAPIVNPVAVHRAPSSFVPAQPQSLTLDFTKPNILSSNTKSLELEFSKETFSVSSNSSFMSSAITGDGSVSNGKQGTSIFLTPAAPTVSGGKPPLSTGPVKKRCQDHRVQSDDVSGSSKCHCVKRRKNRVKETVRVPAISTKIADIPPDEFSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERASDDPTMLIVTYEGEHRHAAESAMQENVAGSVGLVFESTRGS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1494 349 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 331 IPR044810 GO:0003700
Glsi08g1494 349 SUPERFAMILY WRKY DNA-binding domain 265 326 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g1494 349 MobiDBLite consensus disorder prediction 70 103 - -
Glsi08g1494 349 ProSiteProfiles WRKY domain profile. 262 328 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g1494 349 MobiDBLite consensus disorder prediction 221 238 - -
Glsi08g1494 349 FunFam WRKY transcription factor 65 251 328 - -
Glsi08g1494 349 Pfam WRKY DNA -binding domain 269 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi08g1494 349 Pfam Plant zinc cluster domain 221 265 IPR018872 -
Glsi08g1494 349 MobiDBLite consensus disorder prediction 203 238 - -
Glsi08g1494 349 Gene3D WRKY domain 252 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi08g1494 349 MobiDBLite consensus disorder prediction 75 103 - -
Glsi08g1494 349 SMART WRKY_cls 267 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1494 Glsi-ChrGlsi08 10851152 10852646 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1494 1 345 WRKY Transcription Factor Family AT2G24570 59.831 1.32e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi08g1494 WRKY 1.2e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1494 08 10851152 10852646 Glsi08g1494 08 10851152 10852646 ECH