Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1485 ATGTGGTTTACAAAGAATCAATCGGAGAGGAAGGATGGTAATGGTGTGAAAGGAACAGTAGCAGTGGCAATAGACAAAGACAAGGGGAGCCAAAATGCAATCAAATGGGCCATTGATAATCTCCTCACCAGAGGGGCAACTGTAGTTCTCATCCATGTTAAGGCAACTTCTTTTTCTGCATCAGGTTCTCTTCAATCCCCAAGGATGAATAGGAATAATGACGAGGGTTCACTGGTATGCAAAGATTCTGATGTCCACACCAAGGAAATTTTTCTCCCATATCGTGTCTTTTGTACACGGAAAGACATACAAACCAAGGATGTGCTACTAGAAGACGCAGATGTAGCGAAAGCTTTAATTGAATATAGTTCTCACACAACAATTGAGCATTTAGTTCTTGGCTCTTCACCGAAAACTGGTTTGCTAAGAAGATTCAAGGTAGCTGATATTCCAGGAACGGTGGCAAAAGGGGCACCGGATTTCTGTACTGTCTACGTTGTCGCTAAAGAAAAGATTCAATCCATGCGATCAGCCTCTCGTCCTGCTCCAGCCATTGTCACTCCTGTCAATCAACCAACCAAGGCAGAACAATCAGACCCACAAGTGCTGCTGGCTAATTATAGAAATGAAAGGCGATCCTGTGATGCCCCTCGTAGATCACAGGATGGAACAGAACCTTTCAGGTCACCATTCACTAGGAGAAATTTCTATGGCAAGTCATACGGGGAAAATTCCCTTCCAAGCTCTGAAGGACCGAGGACAGACCGCTTGTTCGGCTCATCAATTGACAGCCCAGATATGGGGATGTCCAATCCTGGGGTATCATACACCTCAGAGACGGATGAAAATCATAGCTTTGAGTCCCTGCAGTATGGAAGGAGGTCTGTGGATATAAGTTCTCCTCCTGAATTCTCATCAATCTCACAAGATAGTGACAGATTTTCTTCTTGTACGCCACACGCCATGGATGATATGGAGGCTGAAATGAGGAGACTAAAGTTGGAGCTTAAGAAAACAATGGAAATGTATAGCACTGCCTGTAAAGAAGCACTCACAGCGCAGCAGAAGGCAATAGAACTCCAGCGTTGGAAATTGGAGGAAGAGAGGAGATTGGAAGAGGCAAGGCTTGCTGAGGAAGCTGCATTAGCGATTGCAGAAAAGGAGATGGCCAAATCCAAAGCAGCCATTGAGGCTGCTGAAGCACAAAAGAGGATTGCAGAATTGGAAGCACAAAAGAGACTTGTCGCAGAAACGAAAGCACTTAAAGAGTCAGAAGAGAAAAGAAAAGCACTTGATGCTTTAATAAACATAGATGTCAGATATAGAAAGTATTCGATCGAGGAGATTGAAGCTGCAACCCAGTTCTTTGCAAAGTCCCAAAAGATTGGAGAAGGGGGTTATGGTCCAGTATATAAGTGCTATCTGGATCATACACCTGTTGCAGTGAAGGTTCTACGTGCTGATGCAACACAGGGAAGGTCGCAGTTTCAAAGAGAGGTTGAGGTACTGAGCTGCATTAGGCATCCAAACATGGTTCTCCTCCTGGGAGCCTGCCCAGAGTATGGCTGCCTTGTCTATGATTACATGGCCAATGGAAGCTTAGAGGATCGCCTATTTCGTCGTGGAAACAGTCCCTCGCTTCCTTGGCAGCTTAGGTTCAAAATTGCAGCTGAAATTGGCACTTGCTTGTTGTTCCTCCACCAGAGAAAACCAGAGCCTCTGGTGCACAGGGACTTGAAACCTGCTAACATCTTGCTTGACAGCAACTATGTAGCCAAGGTCAGTGATGTGGGTTTAGCCAGGCTAGTTCCACCCTCTGTCGCTGACAATGTCACACAGTATCGTATGACATCCACAGCTGGAACTTTCTGCTATATAGATCCAGAGTACCAGCAGACAGGAATGCTAGGGGTAAAATCTGATATATATTCCCTTGGGATCATTTTCCTGCAAATTTTAACAGCAAGACCACCAATGGCTTTGACCCATCATGTTGACAGAGCAATTGAGAAAGGAACTTTTGCTCAGATGCTGGATCCAACAGTGCCTGACTGGCCAGTAGAGGAGGCCTTGAGCCTTGCAAAGCTGGCAATCAAGTGTGCAGAGTTAAGGCGGAAAGACAGACCTGATCTTGCCAAGGTAGTCTTACCAGAACTACACAGATTGAGAGTACTGGCTGAAAAGACTAATTACCTTGGTGTTTTGGGTGGCTGTATAAATTCATGCAACCAGGGCCAAGTTTCTGTGCAACTGGATGGAGCCAGTCCTCCATTTCCTCATTCTGGGGAGAGCGCAAGAAACAGATCAAGCCCTGTTTGA 2319 0.4558 MWFTKNQSERKDGNGVKGTVAVAIDKDKGSQNAIKWAIDNLLTRGATVVLIHVKATSFSASGSLQSPRMNRNNDEGSLVCKDSDVHTKEIFLPYRVFCTRKDIQTKDVLLEDADVAKALIEYSSHTTIEHLVLGSSPKTGLLRRFKVADIPGTVAKGAPDFCTVYVVAKEKIQSMRSASRPAPAIVTPVNQPTKAEQSDPQVLLANYRNERRSCDAPRRSQDGTEPFRSPFTRRNFYGKSYGENSLPSSEGPRTDRLFGSSIDSPDMGMSNPGVSYTSETDENHSFESLQYGRRSVDISSPPEFSSISQDSDRFSSCTPHAMDDMEAEMRRLKLELKKTMEMYSTACKEALTAQQKAIELQRWKLEEERRLEEARLAEEAALAIAEKEMAKSKAAIEAAEAQKRIAELEAQKRLVAETKALKESEEKRKALDALINIDVRYRKYSIEEIEAATQFFAKSQKIGEGGYGPVYKCYLDHTPVAVKVLRADATQGRSQFQREVEVLSCIRHPNMVLLLGACPEYGCLVYDYMANGSLEDRLFRRGNSPSLPWQLRFKIAAEIGTCLLFLHQRKPEPLVHRDLKPANILLDSNYVAKVSDVGLARLVPPSVADNVTQYRMTSTAGTFCYIDPEYQQTGMLGVKSDIYSLGIIFLQILTARPPMALTHHVDRAIEKGTFAQMLDPTVPDWPVEEALSLAKLAIKCAELRRKDRPDLAKVVLPELHRLRVLAEKTNYLGVLGGCINSCNQGQVSVQLDGASPPFPHSGESARNRSSPV 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1485 772 Pfam Universal stress protein family 19 159 IPR006016 -
Glsi08g1485 772 Pfam Protein kinase domain 457 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1485 772 SMART serkin_6 456 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1485 772 MobiDBLite consensus disorder prediction 210 319 - -
Glsi08g1485 772 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 429 528 - -
Glsi08g1485 772 MobiDBLite consensus disorder prediction 753 772 - -
Glsi08g1485 772 MobiDBLite consensus disorder prediction 264 316 - -
Glsi08g1485 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 574 586 IPR008271 GO:0004672|GO:0006468
Glsi08g1485 772 MobiDBLite consensus disorder prediction 238 255 - -
Glsi08g1485 772 SUPERFAMILY Protein kinase-like (PK-like) 438 715 IPR011009 -
Glsi08g1485 772 Coils Coil 348 428 - -
Glsi08g1485 772 Gene3D Transferase(Phosphotransferase) domain 1 529 731 - -
Glsi08g1485 772 CDD STK_N 19 169 - -
Glsi08g1485 772 ProSiteProfiles Protein kinase domain profile. 456 723 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g1485 772 Coils Coil 322 342 - -
Glsi08g1485 772 Gene3D Phosphorylase Kinase; domain 1 436 528 - -
Glsi08g1485 772 Gene3D HUPs 4 167 IPR014729 -
Glsi08g1485 772 PANTHER OS02G0152300 PROTEIN 20 728 - -
Glsi08g1485 772 FunFam U-box domain-containing protein 51 529 729 - -
Glsi08g1485 772 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 19 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1485 Glsi-ChrGlsi08 10808014 10811725 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1485 1 749 Receptor kinase-like Gene Family AT1G78940 55.208 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Glsi08g1485 Pkinase 4.7e-41 CL0016