Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1474 ATGGAGCCGAAATCGGATGGTGCTATGGCTACGTGCCCTGCCAGTCAATCTCTGGACGCGTCGTCCATTTTCTCTGGCGTCGGCGACTTCAAACAGACCCTGTCGGAGTTGGAGCTCGAAGAGTTACTGAAGAAGGCCGTCGGAGCCGATATGGGAAGCGGATCGGCGAACGACGAGGAATTGAAACCGAGCGAGTTTTGGAGCCAGAGAGATGCATTCCTTGGCGGCGGCGTTTGCTCCGATGACCTCAACGCCGCTTTCCGAAATACGGACGCAGTGACTGGATTTTCAAGATGTGGTGGACTTACAGATAACCTTCTCTGGTCCCAAAACGTCAATCCCAAGCATTCGACCATCTCTGCTACGATTGATTCTCAGTCATCGATTTGTGGAACAGTTTGCAGCCCAGTGTCAGCTAATAAACCAAACGGCAGCGATAATCAAGCAAAAGGAACTACAAGTGGTTCCTCACGTGAGCAATCTGAGGAGGATGACGAAGCAGGTCCTTGTGAACAGAGCACTAATCCTCTTGATATGAAGCGTCTTAGAAGGAAGGTTTCAAACCGGGAATCTGCCAGAAGATCAAGAAGGAGAAAACAAGCGCATTTGGCCGACCTTGAATTGCAGGTTGAACAACTGAGATTGGAAAACGCAACCCTATACAAGCAGCTTACAGATGCCAGTCAACAATATCGCGAGGCTGATACGAATAACCGAGTGCTAAAATCAGATGTCGAAGCTTTGAGAGCTAAGGTGAAGTTAGCTGAAGATATGGTCACTCGGGGCTCCTTGACCTCCACCTTAAACAACCAGCTTCTTCAGAATCAGAATCACTTAAGCACACCACCACCTCAACTTGACCCAATCGGTCTGCGCCCCATGCCAAATGTCTCGCCAACCATCACTGTGCGTGGAAATGATGCATCATATGCTGGTATTGCAGTTGATGGTCGCAATTCATCTCTTGGACTTGGAAACCTAAATATCAGTAACACCGATTTCAACACTGGAGTTATAGGTGATGCTATGAGCTGTGTGACTGGAATCTGGCAGTGA 1056 0.4877 MEPKSDGAMATCPASQSLDASSIFSGVGDFKQTLSELELEELLKKAVGADMGSGSANDEELKPSEFWSQRDAFLGGGVCSDDLNAAFRNTDAVTGFSRCGGLTDNLLWSQNVNPKHSTISATIDSQSSICGTVCSPVSANKPNGSDNQAKGTTSGSSREQSEEDDEAGPCEQSTNPLDMKRLRRKVSNRESARRSRRRKQAHLADLELQVEQLRLENATLYKQLTDASQQYREADTNNRVLKSDVEALRAKVKLAEDMVTRGSLTSTLNNQLLQNQNHLSTPPPQLDPIGLRPMPNVSPTITVRGNDASYAGIAVDGRNSSLGLGNLNISNTDFNTGVIGDAMSCVTGIWQ 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1474 351 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 183 198 IPR004827 GO:0003700|GO:0006355
Glsi08g1474 351 MobiDBLite consensus disorder prediction 136 156 - -
Glsi08g1474 351 FunFam BZIP transcription factor 178 229 - -
Glsi08g1474 351 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 178 241 IPR004827 GO:0003700|GO:0006355
Glsi08g1474 351 SMART brlzneu 176 240 IPR004827 GO:0003700|GO:0006355
Glsi08g1474 351 CDD bZIP_plant_GBF1 181 232 IPR045314 GO:0003700|GO:0006355
Glsi08g1474 351 MobiDBLite consensus disorder prediction 136 200 - -
Glsi08g1474 351 SUPERFAMILY Leucine zipper domain 180 231 IPR046347 GO:0003700|GO:0006355
Glsi08g1474 351 Pfam bZIP transcription factor 179 231 IPR004827 GO:0003700|GO:0006355
Glsi08g1474 351 Gene3D - 179 236 - -
Glsi08g1474 351 Coils Coil 189 258 - -
Glsi08g1474 351 PANTHER BASIC LEUCINE ZIPPER 63 21 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1474 Glsi-ChrGlsi08 10725938 10729243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1474 102 350 bZIP Transcription Factor Family AT5G24800 52.362 3.00e-68 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Glsi08g1474 bZIP_1 3.5e-11 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1474 08 10725938 10729243 Glsi08g1474 08 10725938 10729243 ECH