Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1436 ATGGAGCAGAGTGAAACAACTTCCGACTTAGCACCGCGGAAACTGGCTCGGCAATTGGATTTCTCGGCCATCAGTGGAGGTTCGGCGAACGCGGAATTTTTGAAGCTACCTGAATCTCAGACACAGTTGGAGCTACAGACGCAGACGCCGCAATCACTGTCACAATCGATTTTGCTGCCACAATCACAGTCGCTGTCACAAATACAAATTCAACCGAAGTTGCAGTCGCAGGCATACCCGCCGTGGTCGTCAACACAACTGCAATTACCTTTACAGTCGCGGGGACAGCAGCCATGGTCATGTTCACACACGCAACAGCAGGGAGCATCACGGTCTCAGGTAAAGCAGCAATTGCAAGCGCGGCCACAGCTAGTTTCACCTGTTCGTCGAATTCCACACCCTGTGCAGAAAATTCCGGTGACGACGTTACAATTGTTGAAGCAAGAGTCTCCTAGACCACGACCTTGGTATAATGTGGAATCCAAAGACAGCACTCCCAAGAAACAAAGGCAATGCAACTGCAAAAATTCTCGATGCCTCAAATTGTACTGTGAGTGCTTCGCAGCTGGGATCCACTGCGATGGCTGCAATTGTGTAAATTGTCATAATAATGAGGATAATGAGGCAGCCAGACAGGAGGCAGTTGGAATAACATTAGAGCGCAATCCAAATGCTTTCAGACCAAAAATTGCTAGTAGTCCACATGAACCACGGGATTCCAAGGAAGAGGCTGAAATTCAAGTATTAGGAAAGCATAATAAAGGATGTCACTGCAAGAAATCAGGTTGCCTTAAGAAGTATTGTGAGTGCTTCCAAGCCAATATTCTCTGCTCTGAAAATTGTAAATGCATGGACTGCAAGAATTTTGACGGAAGTGAAGAAAGAAGAACTCTTAATCCAATTCACATCAAACAGGCAGCTAATGCTGCTATTAGTGGAGCAATTGGGTCCTCTGGCTATAGGACCAATATAACACCTAAGAGGCGAAAAATTCAGGACATATTTTCTGGCAAAGCACCCATAGATCAAACTGTTTGCTCAGCTGCTCAAGGCCAACAGGAAAATGATCCAGTAATTTCCTCACCTTCTGCTCTGTCAATGTCCCTTGTCTCCGACACTGCCAATGCAACAATTCTAGGGTCTTCAAGATCTACGTATAGGTCCCCATTGGCGGATGCTCTCCAGCCACAGGATGTGAAGTATCTGTGTTCACTTTTTGTTGTTCTCTCAGGAGTAGCTGCAGAGACAATTGCAGAGATAAGATGTGAAGTAGACCGGCAAATGGAGATCGATAAATTTGAAACCTCTGTTACTTCATCAGCTCAATTGCTGCAAGACACTAAAGAAGTCCACAAGCCTGTTTGTGATGGTCATGTGAACAAAAATGAAGTCGACAGAGGTGAAACCAGTGATTCTGGATCGGATGGAGTTGATATGCAGAATTATAGTAGGCCATTGTCACCGGGAACACTAGCATTGATGTGTGATGAACAAGATGACATGTTTTTACCCAATAGTTCTGCCAATGAAGCAGCATGCAATGGTCAAAAAATGATTCAGAAGTCATCAAATTCTGATGGATACACGGATGTTTATGAAGAGCAGGAACGACTTGTGCTCACCAGGTTTTGGGATGTTCTTCGTGGACTCATCACTCGTGGAAGCATAAAAGAAACAATGTTCTCTCCATTAGCCAAGAAAGAGGAGGGAACCAAACGAGAAGCTGCAGAGAATGGCAACAATGGAGCTGAAACTGATTTAAGAAATGAGAAGGGAAAGGGACTTCACAGGCACGACAATCGCATTGCAAAGTACCCCATCCCAGAAGCTATTGAAGTATCTCAGACAAATAGTGCCATAACTAATGGACATGGTAACAATGATCTGTCGTTAAGGATTGGTTTGCCTACTGGAATAGCCGGGGTGATAAAATCTCAACTATTGTGA 1947 0.4468 MEQSETTSDLAPRKLARQLDFSAISGGSANAEFLKLPESQTQLELQTQTPQSLSQSILLPQSQSLSQIQIQPKLQSQAYPPWSSTQLQLPLQSRGQQPWSCSHTQQQGASRSQVKQQLQARPQLVSPVRRIPHPVQKIPVTTLQLLKQESPRPRPWYNVESKDSTPKKQRQCNCKNSRCLKLYCECFAAGIHCDGCNCVNCHNNEDNEAARQEAVGITLERNPNAFRPKIASSPHEPRDSKEEAEIQVLGKHNKGCHCKKSGCLKKYCECFQANILCSENCKCMDCKNFDGSEERRTLNPIHIKQAANAAISGAIGSSGYRTNITPKRRKIQDIFSGKAPIDQTVCSAAQGQQENDPVISSPSALSMSLVSDTANATILGSSRSTYRSPLADALQPQDVKYLCSLFVVLSGVAAETIAEIRCEVDRQMEIDKFETSVTSSAQLLQDTKEVHKPVCDGHVNKNEVDRGETSDSGSDGVDMQNYSRPLSPGTLALMCDEQDDMFLPNSSANEAACNGQKMIQKSSNSDGYTDVYEEQERLVLTRFWDVLRGLITRGSIKETMFSPLAKKEEGTKREAAENGNNGAETDLRNEKGKGLHRHDNRIAKYPIPEAIEVSQTNSAITNGHGNNDLSLRIGLPTGIAGVIKSQLL 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1436 648 MobiDBLite consensus disorder prediction 567 595 - -
Glsi08g1436 648 PANTHER TESMIN/TSO1-RELATED 16 556 IPR028307 -
Glsi08g1436 648 MobiDBLite consensus disorder prediction 457 472 - -
Glsi08g1436 648 MobiDBLite consensus disorder prediction 457 481 - -
Glsi08g1436 648 MobiDBLite consensus disorder prediction 96 117 - -
Glsi08g1436 648 SMART CXC_2 251 292 IPR033467 -
Glsi08g1436 648 SMART CXC_2 167 207 IPR033467 -
Glsi08g1436 648 ProSiteProfiles CRC domain profile. 168 291 IPR005172 -
Glsi08g1436 648 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 254 288 IPR005172 -
Glsi08g1436 648 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 170 205 IPR005172 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1436 Glsi-ChrGlsi08 10454440 10460319 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1436 13 566 CPP Transcription Factor Family AT4G29000 44.348 2.49e-135 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Glsi08g1436 TCR 2.9e-12 No_clan