Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1430 ATGGGCTGTCGTTTGGGCTTTTATATTGAGATTAAGTTGAAGTGTAAACAGAGTGAGAAGGGTGGCAACACGAGCGTTGCAATGGCGTCATCCTTATCAGCAGCGCTGAATCTCTCTACAGTTAGACCTTCTACTCCACCATTACCACGCTCTTTATGTTTCCCCTCAATACGAAACTGTTGTTACAATCCTTCTCGAAGGCTAGCTCTCTTTCATCTCGGTACCGCTCTCCCCCAATCCAATTTATTTGTTGCAAAAGAATCTGAGGTTTCTAAAGCAGAGGGGCGGGCAACAGAGGCCACTGCTGCAGGAAAACTAGCCCAACCAGACACTGTTGATACCGAACAAAATGTAATGGATTGGGTCAAAAATGACAAGCGAAGATTGCTCCATGTGGTATATCGTGTAGGGGACCTGGAGAAGACTATAAAGTTCTATACTGAATGCCTTGGTATGAAGCTATTGAGAAGACGTGATATACCAGAAGAGAGATATACAAATGCCTTTCTTGGATACGGTCCTGAAGATTCCCATTTTGTAGTTGAACTTACTTACAATTATGGAGTGGATAAATATGACATTGGAACTGGTTTTGGTCATTTTGGTATCGCAGTTGAAGATGTTGCCAAGACAGTGGATCTAATAAAGGCGAAGGGGGGAAAGGTTACGAGGGAACCAGGGCCTGTCAAAGGTGGCAGAACAGTAATTGCCTTCATTGAAGATCCTGATGGCTATAAGTTTGAGCTTCTCGAGAGAGGACCTAGTCCAGAACCCCTATGCCAAGTAATGCTTCGAGTAGGTGATATTGACCGAGCCATAGCCTTCTATCAAAAAGCTTTTGGCATGAAACTTCTCCGCAAAAAGGACAACCCTGAGTACAAGTATACAATAGCCATGATGGGCTATGGTCCTGAAGATAGGAATGCTGTGCTTGAACTGACATATAACTATGGGATCACCAATTATGACAAAGGAAATGGTTATGGACAGATTGCAATAGGCACGAATGATGTCTATAAGACTGCAGAAGCAATTAAACTGTATGGAGGGAAGATTATCCTTGAACCTGGGCCGTTGCCTGGTATCAACACCAAGATAGTAGCTTGCTTGGACCCTGATGGTTGGAAATCGGTATTTGTTGATAATGCTGATTTTCTGAAGGAATTAGAGTGA 1173 0.4331 MGCRLGFYIEIKLKCKQSEKGGNTSVAMASSLSAALNLSTVRPSTPPLPRSLCFPSIRNCCYNPSRRLALFHLGTALPQSNLFVAKESEVSKAEGRATEATAAGKLAQPDTVDTEQNVMDWVKNDKRRLLHVVYRVGDLEKTIKFYTECLGMKLLRRRDIPEERYTNAFLGYGPEDSHFVVELTYNYGVDKYDIGTGFGHFGIAVEDVAKTVDLIKAKGGKVTREPGPVKGGRTVIAFIEDPDGYKFELLERGPSPEPLCQVMLRVGDIDRAIAFYQKAFGMKLLRKKDNPEYKYTIAMMGYGPEDRNAVLELTYNYGITNYDKGNGYGQIAIGTNDVYKTAEAIKLYGGKIILEPGPLPGINTKIVACLDPDGWKSVFVDNADFLKELE 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1430 390 ProSitePatterns Glyoxalase I signature 1. 261 282 IPR018146 GO:0004462|GO:0046872
Glsi08g1430 390 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 127 257 IPR029068 -
Glsi08g1430 390 FunFam Lactoylglutathione lyase 125 254 - -
Glsi08g1430 390 ProSitePatterns Glyoxalase I signature 1. 131 152 IPR018146 GO:0004462|GO:0046872
Glsi08g1430 390 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 258 382 IPR037523 -
Glsi08g1430 390 SUPERFAMILY Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase 259 380 IPR029068 -
Glsi08g1430 390 NCBIfam lactoylglutathione lyase 128 253 IPR004361 GO:0004462|GO:0046872
Glsi08g1430 390 FunFam Lactoylglutathione lyase 255 390 - -
Glsi08g1430 390 ProSitePatterns Glyoxalase I signature 2. 195 207 IPR018146 GO:0004462|GO:0046872
Glsi08g1430 390 PANTHER LACTOYLGLUTATHIONE LYASE 110 390 - -
Glsi08g1430 390 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 261 376 IPR004360 -
Glsi08g1430 390 Pfam Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 129 249 IPR004360 -
Glsi08g1430 390 CDD GlxI_Ni 129 250 - -
Glsi08g1430 390 Gene3D - 102 253 IPR029068 -
Glsi08g1430 390 Gene3D - 255 390 IPR029068 -
Glsi08g1430 390 ProSiteProfiles Vicinal oxygen chelate (VOC) domain profile. 128 252 IPR037523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1430 Glsi-ChrGlsi08 10396510 10400852 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1430 259 379 Calmodulin-binding Proteins AT1G08110 27.891 1.33e-10 59.3