Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi08g1408 | ATGGCCAGAGGAGTTCAAACGTTTCCAAAGTCGATCACGTTTATGTGCCTCGTCATGTTCGTGTTCAACCTTCACTCATCACATGGGGATGAACTTGAGCTTCTGTTAGCCTTCAAAGCTTCAATCAACGACCCACTTCACTTGCTTTCCAACTGGGTTAGTTCCTCTTCTACTATCTGCAACTGGTATGGAGTCACCTGCGACAACTCCTCTAATGTTAACGCCATCGAGCTCTCTGGGAAAAACATCTCCGGCATGATATCCTCGTCCATATTTCAACTGCCAAATGTTAAACATATCGACATCTCAAACAATCAGTTGGCTGGGCAGGTTGCTGTAAAGTCTCCTTCGTCTCTCTCTTCACTTCGTTACCTCAATCTCAGCAACAACAATCTAACTGGTTCGCTACCAAAGAGTTTATTTTCCATGTCGTTTTCCGACCTCCAAACCCTGGATCTCTCAAACAACATGTTTTCCGGTAAAGTACCAGATGAAGTTGGATTGCTTTCCAGTCTAAGGTATCTTGATCTGGGAGGAAACGTTTTGGTGGGAAAAATTCCAAATTCCATCACCAACTTGACAAGTTTGCAATACTTGACGTTGGCTTCGAACCAGTTAGTGGGTCAAGTCCCACAAGAAGTAGGTCTAATGAAGAGCTTGAAGTGGATTTACTTTGGATACAACAACCTCTCAGGTGAGGTTCCAATGGGCATTGGAGAATTAGTCTCTTTGAATCATCTTGATCTTGTTTACAACAATTTCACAGGACAAATTCCCGAGACCCTCGGAAACCTCACTAATCTTCAGTATCTCTTCCTCTACCGAAACAAACTTATAGGTCCAATTCCCCGATCCATTTTCGAGCTAAAAAACCTTATTTCGCTTGATCTCAGCGATAATTCTCTTTCGGGTGAGATTTCTGAGCTTGTGATTCAGCTCCAGAGATTAGAGATTCTTCACCTTTTCTCGAACAACTTTACCGGACAGATTCCAAGCGCTTTAACCTCTTTACCTCGCCTTCAAGTTCTCCAGCTATGGTCCAACAGATTAACTGGTGAAATTCCAAAAGAGCTGGGAAAGCATAACAACCTCACCGTTTTGGACCTTTCAACCAACCACCTTTCCGGGGAGATTCCAGATAGTTTATGTGACTCGGGCAGTCTTTACAAGCTTATCCTGTTCTCTAACTTTCTGGAAGGACAAGTCCCAAGTAACTTAAGCTCTTGCAGAAGCTTACGCAGAGTACGTCTCCAAAACAACAAGCTTTCCGGGGAATTGCCATCAGAATTAACCAAACTGCCTCAGATATACTTGTTGGACATCTCTGGCAATGAACTTTCTGGGAGGATCGATGACAGGAAGTGGGATATGCCGGCACTTCAAATGCTGAATTTGGCTAAAAACAACTTGGCGGGGAAGTTACCAAACTCTTTTGGGAGTAACAAACTCGAGAACTTGGACTTATCGGAGAATAACTTTTCAGGTTATATTCCAGCAGGGCTTGGGAGCTTATCAGAGCTCATGCAACTGAAGCTAAGTAATAACAGGATCTCCGGTAATATCCCGAATGAACTTTCTTCATGCAAAAAGCTTGTGGCTTTAGACCTCAGTCACAACCAACTTAGCGGGCAACTACCAACCAGTCTTGGCGAGATGCCTGTTCTTGGCCAGCTTGATGTGTCAGAAAACCAATTGTCCGGTAAAATTCCCCACAACTTAGGAAGCGTGGAATCTCTTGTTGAGGTGAACATATCCCACAACCATTTTCATGGAACTTTACCGTCCACAGCAGCTTTTCTTGCCATTAATGCGAGTGCAGTCACTGGAAACCACCTTTGTGACAGTGACACTGATAGCACGAGCGGGTTGGCACCATGCGAAACAGATAGGAATCCAACTTGGTGGTTTGTTATATTATGTTTTCTGGCAGGATTAGCCGCATTTGCGTTGGGTGCTTTTCTCATTTTTTACGTGCGTAGGAGAAAGAGTTTGGAGGTGCGAAGGGTGGAAAATGAAGATGGCACTTGGGAAATGCAGTATTTTAACTCCGAGACTTGGAAACTGATCACTATCGACGATGTTTTCTGTTCGGCAAAAGAAAGAAATGTCATTTCCAAAGGAAGAAACTGGATTTCATACGAAGGGAAGTGCATGGCAAATGACATGCAATTCGAAGTGAAAGAGATAAGTGACCTAAATTCAGTTCCTTTGAATTTTTGGGAAGACATGGTGGAGATCGGTAAGCTCCGACATCCGAACATCGTTAAGTTGATAGGAATATGCAGGTCCGGTAAGGGAGGGTACTTGGTGTACGAGTATGCCGAGGGAAAGAGTTTAAGCCAAGTTGTAAGAAATTTGAGCTGGGAACGTCGGCGGAAAATTGCGGTTGGAATTGCAAAAGCACTAAAGTTTTTGCATGCTCATTGTTCACCTGTTGTTTTGGTGGGTGAGATGTCACCTGAGAGAGTTTTGGTGGACGGAAGAGATGTTCCTCGTCTCAAGTTAAGCCCTCCGGGAACTATATGTACGGATGTCAAGGGTTCCATTTCGTCAGACTACGTTTCTCCAGAAGCAAGAAATAGCAAAGAGGTCACAGGGAAGAGTGACATATACGGATTCGGCCTTATTCTGATCGAATTATTGACCGGAAGAAGTCCGATGGACGCGGAAGTGGGCATGCAAGGGAGCATTGTAGAGTGGGCCCGCTATTGCTATTCGGATTGTCATTTGGACATGTGGATCGACCCGATGATGAAGGGTGGGTTTGCATCGATCACTCGCGACAACATCGTTCGGACTATGGACCTCGCCCTTCACTGCACCGCCACTGATCCCACGGCAAGGCCATGCGCAAGCCACGTACTCAAAGCCCTGCGCGCTGTTACCACCTGA | 2892 | 0.4502 | MARGVQTFPKSITFMCLVMFVFNLHSSHGDELELLLAFKASINDPLHLLSNWVSSSSTICNWYGVTCDNSSNVNAIELSGKNISGMISSSIFQLPNVKHIDISNNQLAGQVAVKSPSSLSSLRYLNLSNNNLTGSLPKSLFSMSFSDLQTLDLSNNMFSGKVPDEVGLLSSLRYLDLGGNVLVGKIPNSITNLTSLQYLTLASNQLVGQVPQEVGLMKSLKWIYFGYNNLSGEVPMGIGELVSLNHLDLVYNNFTGQIPETLGNLTNLQYLFLYRNKLIGPIPRSIFELKNLISLDLSDNSLSGEISELVIQLQRLEILHLFSNNFTGQIPSALTSLPRLQVLQLWSNRLTGEIPKELGKHNNLTVLDLSTNHLSGEIPDSLCDSGSLYKLILFSNFLEGQVPSNLSSCRSLRRVRLQNNKLSGELPSELTKLPQIYLLDISGNELSGRIDDRKWDMPALQMLNLAKNNLAGKLPNSFGSNKLENLDLSENNFSGYIPAGLGSLSELMQLKLSNNRISGNIPNELSSCKKLVALDLSHNQLSGQLPTSLGEMPVLGQLDVSENQLSGKIPHNLGSVESLVEVNISHNHFHGTLPSTAAFLAINASAVTGNHLCDSDTDSTSGLAPCETDRNPTWWFVILCFLAGLAAFALGAFLIFYVRRRKSLEVRRVENEDGTWEMQYFNSETWKLITIDDVFCSAKERNVISKGRNWISYEGKCMANDMQFEVKEISDLNSVPLNFWEDMVEIGKLRHPNIVKLIGICRSGKGGYLVYEYAEGKSLSQVVRNLSWERRRKIAVGIAKALKFLHAHCSPVVLVGEMSPERVLVDGRDVPRLKLSPPGTICTDVKGSISSDYVSPEARNSKEVTGKSDIYGFGLILIELLTGRSPMDAEVGMQGSIVEWARYCYSDCHLDMWIDPMMKGGFASITRDNIVRTMDLALHCTATDPTARPCASHVLKALRAVTT | 963 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi08g1408 | 963 | Gene3D | Phosphorylase Kinase; domain 1 | 662 | 773 | - | - | |
Glsi08g1408 | 963 | ProSiteProfiles | Protein kinase domain profile. | 642 | 962 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Glsi08g1408 | 963 | Gene3D | Ribonuclease Inhibitor | 337 | 621 | IPR032675 | - | |
Glsi08g1408 | 963 | Gene3D | Ribonuclease Inhibitor | 29 | 144 | IPR032675 | - | |
Glsi08g1408 | 963 | Gene3D | Ribonuclease Inhibitor | 236 | 334 | IPR032675 | - | |
Glsi08g1408 | 963 | Gene3D | Transferase(Phosphotransferase) domain 1 | 775 | 963 | - | - | |
Glsi08g1408 | 963 | FunFam | Probably inactive leucine-rich repeat receptor-like protein kinase | 662 | 773 | - | - | |
Glsi08g1408 | 963 | SUPERFAMILY | L domain-like | 312 | 600 | - | - | |
Glsi08g1408 | 963 | ProSiteProfiles | Leucine-rich repeat profile. | 121 | 143 | IPR001611 | GO:0005515 | |
Glsi08g1408 | 963 | Gene3D | Ribonuclease Inhibitor | 145 | 235 | IPR032675 | - | |
Glsi08g1408 | 963 | Pfam | Protein kinase domain | 739 | 956 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Glsi08g1408 | 963 | Pfam | Leucine rich repeat | 482 | 541 | IPR001611 | GO:0005515 | |
Glsi08g1408 | 963 | Pfam | Leucine rich repeat | 315 | 374 | IPR001611 | GO:0005515 | |
Glsi08g1408 | 963 | Pfam | Leucine rich repeat | 148 | 206 | IPR001611 | GO:0005515 | |
Glsi08g1408 | 963 | Pfam | Leucine rich repeat | 243 | 302 | IPR001611 | GO:0005515 | |
Glsi08g1408 | 963 | FunFam | Leucine-rich repeat receptor protein kinase EMS1 | 236 | 320 | - | - | |
Glsi08g1408 | 963 | Pfam | Leucine rich repeat N-terminal domain | 29 | 68 | IPR013210 | - | |
Glsi08g1408 | 963 | FunFam | Leucine-rich repeat receptor-like kinase | 30 | 145 | - | - | |
Glsi08g1408 | 963 | FunFam | Probably inactive leucine-rich repeat receptor-like protein kinase | 321 | 622 | - | - | |
Glsi08g1408 | 963 | Pfam | Leucine Rich Repeat | 121 | 140 | IPR001611 | GO:0005515 | |
Glsi08g1408 | 963 | PRINTS | Leucine-rich repeat signature | 122 | 135 | - | - | |
Glsi08g1408 | 963 | PRINTS | Leucine-rich repeat signature | 289 | 302 | - | - | |
Glsi08g1408 | 963 | SMART | LRR_typ_2 | 145 | 169 | IPR003591 | - | |
Glsi08g1408 | 963 | SMART | LRR_typ_2 | 265 | 289 | IPR003591 | - | |
Glsi08g1408 | 963 | SMART | LRR_typ_2 | 337 | 361 | IPR003591 | - | |
Glsi08g1408 | 963 | SMART | LRR_typ_2 | 119 | 143 | IPR003591 | - | |
Glsi08g1408 | 963 | SMART | LRR_typ_2 | 193 | 217 | IPR003591 | - | |
Glsi08g1408 | 963 | SMART | LRR_typ_2 | 363 | 385 | IPR003591 | - | |
Glsi08g1408 | 963 | SMART | LRR_typ_2 | 457 | 480 | IPR003591 | - | |
Glsi08g1408 | 963 | SMART | LRR_typ_2 | 241 | 264 | IPR003591 | - | |
Glsi08g1408 | 963 | SMART | LRR_typ_2 | 552 | 576 | IPR003591 | - | |
Glsi08g1408 | 963 | SMART | LRR_typ_2 | 504 | 528 | IPR003591 | - | |
Glsi08g1408 | 963 | SUPERFAMILY | Protein kinase-like (PK-like) | 694 | 958 | IPR011009 | - | |
Glsi08g1408 | 963 | SUPERFAMILY | L domain-like | 28 | 355 | - | - | |
Glsi08g1408 | 963 | FunFam | Probably inactive leucine-rich repeat receptor-like protein kinase | 146 | 235 | - | - | |
Glsi08g1408 | 963 | PANTHER | UNNAMED PRODUCT | 171 | 888 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi08g1408 | Glsi-ChrGlsi08 | 10288034 | 10291075 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi08g1408 | 17 | 959 | Receptor kinase-like Gene Family | AT2G25790 | 53.710 | 0.0 | 955 |