Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1375 ATGATATGCCTGTGTGGTCCGCTTTCTGGTCTCTTTGTTCAACCCTTGGTGGGCCACATGAGTGATCGTTGCACCAGCAGGTTCGGCCGCCGCAGAACCTTTATCTTAGTCGGAGCAGCTTCCATCATCTTATCTATTTTGATCATTGGTCAATCTGCAGATATTGGTTGGTGGTTTGGTGACAAAGAGAATTCTCGGCCCATAGCTGCGGCGGTTTTTGTACTCGGGTTTTGGATTTTGGACGTGGCCAACAATATGACCTTTTGTGCAAATCTCAAGTCTGCTTTCTTTCTCGACATTGCTCTCATTGCGGTCACCACATATATCAGCATTGCAGCAACTCATGAAGTGCCTCTCAGTTTGAGTGGGGCAGCCCGTGCTGAACAAGGGGCAGGAGAGTCAGCACCAATATGGATAATCCTGTCTGTTACTGCTCTGACGTGGATTGGATGGTTTCCATTTCTTCTCTTCGATACTGACTGGATGGGTCGAGAGATTTATGGCGGTGAGCCAAATGAAGGCCTTACTTATGATTCAGGAATTAGAATGAGGGCGCTAGGTTTATTGCTGAATTCAGTTGTTCTTGGGAACATCATTGCTCATGGAAAGGCTATGCAGGAAGCGGGGGGCTGGCTTTGTGTGGGGAATCTCAAACATCCTAATGGCTGTCTGCTTTCTTGCAATGCTCGTAGTAACCTATGACTGTTTAAGTTCATTGTTGATACTGACAGGGTTATCAATGGGTGTCCTAAATCTGGCAATAGTGATCCCTCAGATAGTGGTGTCCCTGGGAAGTGGACCATGGGATCAGCTATTCGGTGGAGGAAACTCCCCAGCCTTTGCAGTGGCAGCTGTTGCAGCCCTTGTCAGTGGACTGATAGCGGTCTTGGCTATTCCTCCATCTGGTTCTCAAAAGCCCAGAGCCCACGTATGAGGTATCATGTTCTTTCTGCCTTTGGCACTGGTTTCTTTCTAAGAGGGATGGTGAAAAATGAACAGGCAAAGGAAATAACCGGAGAAAACTTCCAACATCTCAAAACTAGTTTTGGCCTTTGGGTGCTTCAGATGGGTGTAGACAGTAGGAGTTATGTTCGGAGTTGGGAGTGGGTTGGGGAAGAATGGATCATGCATGGCTGGCTTAGAACATGCAATGACATTTCCCTGCCCTCAAAATTAGCAACCAACTACTGTGCAACAATTACAAACTATACAGTCTTCATGTGTAATTCCAAGCCATCTTCAGCTTCCCCATTTCTGTGTCCCACAAAAGCCTATCTCATAACTCCCCACAAAGCCATGGATCAGGATGATCTTCACAGATGGCCAACTCCTAAAGAGGTCTTAGCAGAAATCAAAGCCATAGGCAAGATATCAGGTCCTACTGCCATCACCGGCTTGCTCTTATATTCAAGGGCTATGATCTCTATGCTTTTCCTGGGTTATCTAGGCGAGATGGAACTTGCAGGAGGCTCTCTCTCTATAGGTTTCGCCAACATCACCGGTTACTCTGTCATCTCTGGATTAGCCATGGGAATGGAGCCCATTTGTGGACAAGCTTACGGAGCAAAACAATGGAAAATACTTGGCTTGACACTGCAAAGAACTGTGCTTCTTCTCCTCTCTACTTCCATCCCCATCTCTTTCATGTGGCTAAACATGAAGCGGATCCTCCTCTGGTGCGGTCAAGACGAAGATATATCATCAATGGCACAAACTTTCATTCTTTTCTCCATACCAGACCTTTTCTTCCTTTCACTCCTCCACCCTCTTCGCATCTATCTGAGGACTCAAACCATCACATTGCCATTAACATATTGTTCAGCAATTTCTGTTCTCCTACACGTCCCTCTAAATTTCCTTCTAGTAGTCCATTTCAAGATGGGTATTGCCGGGGTGGCCACAGCAATGGTTTGGACCAATCTCAACCTCTTCCTCTTCCTTTCTTCATTTGTTTACTTCTCCGGTGTACATAAGGACTCATGGGTTTCTCCAAGCATGGACTGCCTCAGGGGATGGTCGTCGCTGCTTGCCCTTGCGGTTCCAACCTGCGTTTCCGTTTGCCTCGAGTGGTGGTGGTACGAGTTCATGATAATACTGTGTGGGCTTCTGGTGAATCCGAAAGCGACAGTTGCTTCAATGGGAATCCTTATCCAAACAACCTCTTTAGTCTATGTCTTCCCCTCATCTCTAAGCTTCGGTGTTTCCACAAGAGTGGGGAATGAATTAGGAGCAAACCGCCCCGGAAAAGCCCGCATTTCCATGATAGTGTCCCTCCTGTGTGCTGTGGCTTTAGGCCTGGCAGCCATGGTGTTTACGATCTTAATGAGGCACCAATGGGGACGATTCTTCACCACCAACCATGAAATTCTCAAGCTTACTGCCGTAGCATTGCCAATTGTGGGGCTGTGTGAGCTCGGAAACTGCCCACAGACCACTGGTTGTGGAGTTCTAAGAGGCAGCGCAAGACCCACCATTGGAGCAAACATCAATTTGGGTTCATTTTACTTTGTGGGTATGCCAGTGGCCATGCTTCTGGGATTTGTAGTCAAAATGGGATTTGCAGGGTTCTGGCTCGGGTTGCTTGCAGCCCAAGCCTCGTGTGCAGCTCTCATGTTATTCGTCCTGTTCAGGACAGACTGGAATTCGCAAGTAGAAAGAGCAAGAGAGCTCACTGAAACTTCAACTACTACTGCTGCTGCTGCCGCTGCTGATAATACCACAATACCCACATTCACAAAAACAGAGTCTAACAAGAATGCTTATCTTCAAGAGATAGTGATCACTGATGATGAGCTCACCAACTCAGCATCGCTCGAAACACACCCACTAATCCTACCCACTACCCAGCACACTGTCAATTAA 2862 0.4724 MICLCGPLSGLFVQPLVGHMSDRCTSRFGRRRTFILVGAASIILSILIIGQSADIGWWFGDKENSRPIAAAVFVLGFWILDVANNMTFCANLKSAFFLDIALIAVTTYISIAATHEVPLSLSGAARAEQGAGESAPIWIILSVTALTWIGWFPFLLFDTDWMGREIYGGEPNEGLTYDSGIRMRALGLLLNSVVLGNIIAHGKAMQEAGGWLCVGNLKHPNGCLLSCNARSNLXLFKFIVDTDRVINGCPKSGNSDPSDSGVPGKWTMGSAIRWRKLPSLCSGSCCSPCQWTDSGLGYSSIWFSKAQSPRMRYHVLSAFGTGFFLRGMVKNEQAKEITGENFQHLKTSFGLWVLQMGVDSRSYVRSWEWVGEEWIMHGWLRTCNDISLPSKLATNYCATITNYTVFMCNSKPSSASPFLCPTKAYLITPHKAMDQDDLHRWPTPKEVLAEIKAIGKISGPTAITGLLLYSRAMISMLFLGYLGEMELAGGSLSIGFANITGYSVISGLAMGMEPICGQAYGAKQWKILGLTLQRTVLLLLSTSIPISFMWLNMKRILLWCGQDEDISSMAQTFILFSIPDLFFLSLLHPLRIYLRTQTITLPLTYCSAISVLLHVPLNFLLVVHFKMGIAGVATAMVWTNLNLFLFLSSFVYFSGVHKDSWVSPSMDCLRGWSSLLALAVPTCVSVCLEWWWYEFMIILCGLLVNPKATVASMGILIQTTSLVYVFPSSLSFGVSTRVGNELGANRPGKARISMIVSLLCAVALGLAAMVFTILMRHQWGRFFTTNHEILKLTAVALPIVGLCELGNCPQTTGCGVLRGSARPTIGANINLGSFYFVGMPVAMLLGFVVKMGFAGFWLGLLAAQASCAALMLFVLFRTDWNSQVERARELTETSTTTAAAAAADNTTIPTFTKTESNKNAYLQEIVITDDELTNSASLETHPLILPTTQHTVN 953
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1375 953 CDD MATE_eukaryotic 450 886 IPR045069 GO:0042910|GO:1990961
Glsi08g1375 953 Pfam MatE 460 620 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Glsi08g1375 953 Pfam MatE 681 843 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Glsi08g1375 953 NCBIfam MATE family efflux transporter 466 857 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Glsi08g1375 953 PANTHER MULTIDRUG RESISTANCE PROTEIN 445 880 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1375 Glsi-ChrGlsi08 10038802 10049194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1375 1 196 Sucrose Transporter Gene Family AT1G09960 44.689 1.50e-55 199