Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1369 ATGGGATTATCCGATTGTTCTTCGGTGGACAGCTCAGTCCCGTCCTTCTCAGACGAGAATAAAAGTAAGCTCAACCTCAAATCCACAGAGCTCAAGCTTGGGCTACCAGGATCTCTGTCTCCTGAAAGACATTCAGATCACTGCTTAAGAAGTTCGACACAATTTGTTGAGAAACCTCTGTTTCCTTTGCGTCTTTCAACTGATGATCACCACTCCTCATCAAAGACTCTTGTTTTGGGTAACAAAAGAGGGTTCTCTGATGCTATGAATGGGTTCTCTGAGGGGCAATACCCAGTAAATTCGGAGGTCAATGCAATATTGTCACCCAGGCTTGACAACGTTGGGGCTCAGCAAGCACCCACAAAGGTGGCACTTGAGAGGTCTCATCTTGTCAATGAAACCAGACCATATCTTAATGGTTCTTCAAATAATAATAATAGCAGTACTACACCAGCTACTAAGGCACAGGTTGTGGGTTGGCCTCCTGTAAGATCTTTTAGGAAAAATCCACTGGCTACTACTACTACTACAAAGAACACTGAAGAAGTAGATGGAAAAGCAGGGGTTGGTGCACTTTTCGTTAAGGTCAGTATGGATGGTGCTCCATATTTAAGGAAAGTGGACTTGAAGAATTACTCTGGATACCCAGAACTAGTTTCTGGTTTAGTGAAAATGTTTGGTTGTTTTACCATAGGTCAATGTGGATCTCACGGAACTCTGGGTAGGGAGATGCTGAATGAAATCAATGTGAAGGATCTGCTTCATGGGTCAGAATACGTTCTAACATATGAGGATAAAGATGGTGACTGGATGCTTGTGGGTGATGTTCCCTGGAAGATGTTTATTGATACATGCAGGAGGATGAGGATCATGAAGAGTTCTGATGCCACTGGTTTAGCTCCCAGGGCTGTGGAAAAAGTAAGAGCAGGAACAAGGTAG 939 0.4366 MGLSDCSSVDSSVPSFSDENKSKLNLKSTELKLGLPGSLSPERHSDHCLRSSTQFVEKPLFPLRLSTDDHHSSSKTLVLGNKRGFSDAMNGFSEGQYPVNSEVNAILSPRLDNVGAQQAPTKVALERSHLVNETRPYLNGSSNNNNSSTTPATKAQVVGWPPVRSFRKNPLATTTTTKNTEEVDGKAGVGALFVKVSMDGAPYLRKVDLKNYSGYPELVSGLVKMFGCFTIGQCGSHGTLGREMLNEINVKDLLHGSEYVLTYEDKDGDWMLVGDVPWKMFIDTCRRMRIMKSSDATGLAPRAVEKVRAGTR 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1369 312 MobiDBLite consensus disorder prediction 1 21 - -
Glsi08g1369 312 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 23 297 IPR003311 GO:0005634|GO:0006355
Glsi08g1369 312 ProSiteProfiles PB1 domain profile. 191 293 IPR000270 GO:0005515
Glsi08g1369 312 Gene3D - 186 305 - -
Glsi08g1369 312 FunFam Auxin-responsive protein 186 303 - -
Glsi08g1369 312 MobiDBLite consensus disorder prediction 135 159 - -
Glsi08g1369 312 MobiDBLite consensus disorder prediction 135 155 - -
Glsi08g1369 312 SUPERFAMILY CAD & PB1 domains 191 292 - -
Glsi08g1369 312 Pfam AUX/IAA family 29 302 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1369 Glsi-ChrGlsi08 9976363 9978261 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1369 195 301 B3 DNA Binding Superfamily AT4G23980 28.704 2.03e-08 53.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Glsi08g1369 AUX_IAA 1.5e-85 CL0072
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1369 08 9976363 9978261 Glsi08g1369 08 9976363 9978261 ECH