Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1364 ATGGAGAACTATTCCTACTCTTCCTACCCTGATTCCCATGATTCCTCCCCAAGGTCTCGCGAAATCGACAACGAGAACCCCTCGTGGGATGAACCTTCCAACAACAACACCACGGCCAACTACAAAGTGAAGTTCATGTGCAGCTATGGCGGAAAAATCCAACCTAGGACCCACGATAACCAACTTGCTTACATCGGAGGGGATACCAAGATCTTAGCGGTTGATCGCAACATCAAGTTCTCCGCTATCATAGCAAAGCTCTCTTCGCTCTGCGATGCCGATGTTTGCTTCAAGTACCAACTTCCCGGTGAGGATCTCGATGCTTTGATTTCGGTCACCAACGATGAGGATCTAGAGCACATGATGATTGAGTATGACCGGTTGTACCGTGCCTCGGCTAAGCCTGCTAGGTTGAGGTTGTTTCTTTTTCCGCTGAACTCTTCGGCTCCGACGAGTTTCGGGTCGAACGAATTGAAATCGGAGCGGCAATGGTTTGTGGATGCTCTCAATTCTGTGCAGATTCAGCAGGTGGATGGTTCTTCACCGCCGGCGCCGGTGTCGGCTGCGAATCCGGATTTTCTGTTCGGGTTGGATAAGGGATACCCGGGGCTTCCAGCGACGAAATTGCCTGATTCTGCTCCTGCTCCAACGGTTCCGGATATAGCGGCGAAGGATTTGTCAACGGGATCAGAATGTGGATCGGAGGACCGGCACGTGGTTGGAGAACTGCTGCTGTCACCTGCTGAGATCCAGAGACAGATCCAGGATTTGCAGAGATTGCAGTTCGTGAACAATGAGCAACTCCTACAGCGGAAAAGCGATGAAGGTAATGGCAAGGTTTATACGGTGGACTATTACTCTCAGAAAAATCCAGAGAAAGTGGCGCCACCTCCGGCGCCGGCCCATGCACATACTGGTCCAGTTCCTTTACCAGGATCAGTTCCGCCGTCGGCGGCAGCGTTTATGCCTGAAAGACATATGACAAGTGCCGGTTATCCACTGGCGGGTTCTGCAACTGGTGCCGAGCAGCAGCCTGTATATCTCATTACAACACCAACCGGAATGTACCATGCTACTACATTGCGACCCATGACTGGACCAGTTGGTCAACCTTTCTATGGTGTCCCGAGAATGGTCCCTGCCGAAATGTACAATGCGGCTCCACCGGCATCACTTTCACATTCACAACCCAAACTTGGGGCTTATACTGAAACTTCTGGAATGGTACAGCCAAAGGTGGGGGTGTCTGAGTCTGGCTATGCTCAGGTGGCATATGACAATGCTGGCAGGCAGGTCTACTATGCGCCGGCGGGGGCGGGGGCGGGGGCGGCGGCATCAGGTGGGGCGGTGCCACAATACCAGGTAATAACGACTGGAATTGATGGGAGACAACAGGGTGGTGGGGCTTTGAATCAAGAGGGTAAGGTTGTTACCAAAGTTACTTCTGCTGTGTGA 1455 0.5244 MENYSYSSYPDSHDSSPRSREIDNENPSWDEPSNNNTTANYKVKFMCSYGGKIQPRTHDNQLAYIGGDTKILAVDRNIKFSAIIAKLSSLCDADVCFKYQLPGEDLDALISVTNDEDLEHMMIEYDRLYRASAKPARLRLFLFPLNSSAPTSFGSNELKSERQWFVDALNSVQIQQVDGSSPPAPVSAANPDFLFGLDKGYPGLPATKLPDSAPAPTVPDIAAKDLSTGSECGSEDRHVVGELLLSPAEIQRQIQDLQRLQFVNNEQLLQRKSDEGNGKVYTVDYYSQKNPEKVAPPPAPAHAHTGPVPLPGSVPPSAAAFMPERHMTSAGYPLAGSATGAEQQPVYLITTPTGMYHATTLRPMTGPVGQPFYGVPRMVPAEMYNAAPPASLSHSQPKLGAYTETSGMVQPKVGVSESGYAQVAYDNAGRQVYYAPAGAGAGAAASGGAVPQYQVITTGIDGRQQGGGALNQEGKVVTKVTSAV 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1364 484 SUPERFAMILY CAD & PB1 domains 58 153 - -
Glsi08g1364 484 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 62 145 - -
Glsi08g1364 484 CDD PB1_UP2 46 143 - -
Glsi08g1364 484 Pfam PB1 domain 58 144 IPR000270 GO:0005515
Glsi08g1364 484 SMART PB1_new 57 145 IPR000270 GO:0005515
Glsi08g1364 484 PANTHER OS05G0427100 PROTEIN-RELATED 8 367 - -
Glsi08g1364 484 MobiDBLite consensus disorder prediction 1 35 - -
Glsi08g1364 484 Gene3D - 63 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1364 Glsi-ChrGlsi08 9937799 9939253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1364 41 172 MAP Kinase Kinase Kinase AT5G57610 43.885 4.26e-29 119