Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1356 ATGAACCTGGGCCAGATTGGGCCGCTTATTCAACTCCAGCTCACAGAAGTGTTTCCTAGCCTGTGGCGAGCGAGAGTCTGGTTGGGAACTTATGAAACTACCGAAGCTGTTGCTTATGCGGATGATTGTGCTGCTTATAAGCTCCGAGGGGAATGTGGTTTGAATTTCCCAAATCTGAAGGACCCAAGTAAGTTAAGATTCGGAGATTGCTCCAGATTGAATGCTTTGAAGACCTTTGTGGACGCTAAAATCCAGGCTATATGTCAGAAGGTGAAGAGGGAGAAAGCCAAGAAGAGTGCCCCAAAGAAGCTTAATTCCAGCACTCACCATATCAGTGGTCAGAGTGAGAAATCAAACAAGATTGACTCATCCTCTTGTTCATCCTCCTCGTTAATTTTTTATGCTAATGGTACTACTAACAAGTTGCTTTCACCGCCCTCTGTTACAGTGTTGAAACAGAGGAATCAGAATTCGAAGGCTGTTCCTTAG 489 0.4479 MNLGQIGPLIQLQLTEVFPSLWRARVWLGTYETTEAVAYADDCAAYKLRGECGLNFPNLKDPSKLRFGDCSRLNALKTFVDAKIQAICQKVKREKAKKSAPKKLNSSTHHISGQSEKSNKIDSSSCSSSSLIFYANGTTNKLLSPPSVTVLKQRNQNSKAVP 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1356 162 Gene3D AP2/ERF domain 15 58 IPR036955 GO:0003700|GO:0006355
Glsi08g1356 162 MobiDBLite consensus disorder prediction 105 126 - -
Glsi08g1356 162 MobiDBLite consensus disorder prediction 139 162 - -
Glsi08g1356 162 SUPERFAMILY DNA-binding domain 21 57 IPR016177 GO:0003677
Glsi08g1356 162 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 23 128 - -
Glsi08g1356 162 MobiDBLite consensus disorder prediction 93 126 - -
Glsi08g1356 162 ProSiteProfiles AP2/ERF domain profile. 19 60 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1356 Glsi-ChrGlsi08 9873366 9874557 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1356 23 107 AP2-EREBP Transcription Factor Family AT1G64380 66.667 3.17e-20 83.6