Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1326 ATGGACCCAAACAGAATCGAAGCCGAGCGCTTGCTTGGGATCGCCGAGAAACTTTTGCAGAACCGGGATCTCAACGGCTCAAGGGACTTTGCCATTTTAGCCCAGGAAACCGAACCCCTTTTGGAGGGTTCAGATCAGATCTTGGCCGTCGTCGACGTGCTACTCGCGTCGGAAAAACGAGTTAACAACCAACACGACTGGTACGCCATTCTTCAGGTGGATCGCCGATCCAACGACTACGATTTCATCAAGAAGCAGTATCGCAGGCTCGCGCTGCTCCTCCATCCAGACAAGAACAGATTTTTCCTCGCCGATCACGCTTTCAGGCTTGTCGCCGAGGCATGGGCTGTGTTATCGGACCAAATTAAAAAGTCGCTCTACGACAAGGACCTCAGCTTCTTTTCTAGGGTTGAATTGACTGTGCCTAGCTGGGTTCAACAAGAAAAATTCCCTGTTCGGAGGGGCGGACCCGGGCCCAGCGGACGGAACCAAGGTTTGGATTCCAGGAATGGTAGCAACGCCGGCAGGGATGACGAAGCGGATGAGAATCAACGGCGGAGATCGTCGACCTTCTGGACGACATGCCCATACTGTTACTTCTTGTACGAGTACCCTGGAGTTTACGAGGGTTGTTGTTTGAGGTGCCAAAATTGCGAGAAGTCCTTCCATGGGGTTTCGATTCCATCTTTGCCGCCCCTTGTGCCGGGACAAGAAGCCTATCATTGTTGCTGGGGTTTCTTTCCAATGGGATTTTTCATTGGAAATTCTGGGGGCAAGGGGGCTACGCCCCCCACGGTGTCCCCCAATTGGACGCCACCGGTATTTGCAACTGGCCAGCAGGCAGAGAATGGTAGGAATAATGGGGAACAGGCGGCGGCCCCCGGGGCGGCGGTCCCAAAGGCGACGGGTGTATCGAATGGGATTGCTCCAGGTTTGGTATCTACTACTAAAAGGAAGCGAGGAAGGCCTCGGAAAAATCCTTTGCCTTCATGA 993 0.5368 MDPNRIEAERLLGIAEKLLQNRDLNGSRDFAILAQETEPLLEGSDQILAVVDVLLASEKRVNNQHDWYAILQVDRRSNDYDFIKKQYRRLALLLHPDKNRFFLADHAFRLVAEAWAVLSDQIKKSLYDKDLSFFSRVELTVPSWVQQEKFPVRRGGPGPSGRNQGLDSRNGSNAGRDDEADENQRRRSSTFWTTCPYCYFLYEYPGVYEGCCLRCQNCEKSFHGVSIPSLPPLVPGQEAYHCCWGFFPMGFFIGNSGGKGATPPTVSPNWTPPVFATGQQAENGRNNGEQAAAPGAAVPKATGVSNGIAPGLVSTTKRKRGRPRKNPLPS 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1326 330 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 290 - -
Glsi08g1326 330 SUPERFAMILY Chaperone J-domain 60 131 IPR036869 -
Glsi08g1326 330 MobiDBLite consensus disorder prediction 150 185 - -
Glsi08g1326 330 SMART dnaj_3 65 123 IPR001623 -
Glsi08g1326 330 CDD DnaJ 66 120 IPR001623 -
Glsi08g1326 330 Pfam DnaJ domain 66 128 IPR001623 -
Glsi08g1326 330 Gene3D DnaJ domain 54 140 IPR036869 -
Glsi08g1326 330 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Glsi08g1326 330 PRINTS DnaJ domain signature 87 102 IPR001623 -
Glsi08g1326 330 PRINTS DnaJ domain signature 103 123 IPR001623 -
Glsi08g1326 330 PRINTS DnaJ domain signature 68 86 IPR001623 -
Glsi08g1326 330 ProSiteProfiles dnaJ domain profile. 66 131 IPR001623 -
Glsi08g1326 330 MobiDBLite consensus disorder prediction 279 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1326 Glsi-ChrGlsi08 9615424 9616416 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1326 2 328 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 51.170 1.81e-106 313