Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1322 ATGACAGGTGAGTATGTGGATCAGCAGAAAGAGGGTGAAACAAGGCCCATCAAGTTCCTAAAGCTCCAGCAACACCAATCGCCACCCCAATACCACCTTTACACACAAAACCCCTACCAAATCTCCCGCCCGGATTCCCAGACCTCAGAAGAGGACAACAGCCGCAGCAGTGGTGGGCCTACCCAGACGCCCAACTCCACCGCCGTCGATGGAGGCACCATTGAGGTGGGGAAGCGAGCCAGAGGTCGGCCTAAAGGTTCCAAGAACAGGCCCAAGGAACCTGTTTATATAACCCGTGATGCCGAGCCTGCCATGAGCCCCTACATTCTGGAAGTCCCAAGCGGGATTGATATGGTTCGAGCCATTACTCAGTTTTGTCGCCGCAAAAACATAGCTCTCTGTATCCTAACCGCTTCTGGAACCGTCGCTAACGTCACCCTCCGTCAGCAGCCCACCAGTCCAGGAGCCAACGAAGCCACCGCCGTCATTTTCAAAGGCTATTACGAGATCCTCTCATTATCAGCCACCATTATCCCTCATTCATCGGAGAGCTTGCCGGCGATGCCCAAGGGCTTCACCATCGCCCTCGCCGGTCCACATGGCCAGATCGTTGGAGGAATACTCGTTGACGGCTTAATCGCTGTGGGGACGGTGTACGTCATAGCCGCTTCCTTCAACAACCCATCCCATCATAGGCTGCCAGTTGAAGACGAGTTGCCGGGTGCGATGCCTATGCATAACCTTCAACTCCCCCCCAATGGGATTTGGACTCCAATCGCTACAACTTCACAACCACCGCCTTACTGA 807 0.5477 MTGEYVDQQKEGETRPIKFLKLQQHQSPPQYHLYTQNPYQISRPDSQTSEEDNSRSSGGPTQTPNSTAVDGGTIEVGKRARGRPKGSKNRPKEPVYITRDAEPAMSPYILEVPSGIDMVRAITQFCRRKNIALCILTASGTVANVTLRQQPTSPGANEATAVIFKGYYEILSLSATIIPHSSESLPAMPKGFTIALAGPHGQIVGGILVDGLIAVGTVYVIAASFNNPSHHRLPVEDELPGAMPMHNLQLPPNGIWTPIATTSQPPPY 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1322 268 Pfam Plants and Prokaryotes Conserved (PCC) domain 107 227 IPR005175 -
Glsi08g1322 268 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 42 238 IPR014476 GO:0003680
Glsi08g1322 268 MobiDBLite consensus disorder prediction 1 95 - -
Glsi08g1322 268 SUPERFAMILY AF0104/ALDC/Ptd012-like 104 237 - -
Glsi08g1322 268 MobiDBLite consensus disorder prediction 20 70 - -
Glsi08g1322 268 PIRSF ESCAROLA 16 254 IPR014476 GO:0003680
Glsi08g1322 268 CDD DUF296 107 225 IPR005175 -
Glsi08g1322 268 ProSiteProfiles PPC domain profile profile. 102 245 IPR005175 -
Glsi08g1322 268 Gene3D - 106 240 - -
Glsi08g1322 268 MobiDBLite consensus disorder prediction 76 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1322 Glsi-ChrGlsi08 9574950 9575756 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1322 69 238 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 59.538 8.25e-64 199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1322 08 9574950 9575756 Glsi08g1322 08 9574950 9575756 ECH