Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1318 ATGATGGTGTGTGATGCATGTTGGTTAGACTGCCCAGCATATGGTCAAGAAATAGGATGCATAATCCCTTCAAAGGTTCCACTTGGTGAATCCTTCGATGATATCATTCCAAGTCAAAAATATTCTCCCAAGCAAGCAATTCTTCAACAAAGACTTTTGGGTAAAGAAATCGGTTTAGTGATTGATTTGACAAATACTACTCGTTACTACCCACTATCAGATTGGACAGGAGAAGGGATTGGTCATGTTAAGCGGGGATGCTTGTTGGCATTGCAAGGAATCCTACTCGTTCTTGTTGATTCCTTACCTGAGGCAATAAATAAATTTGCTTGGGCATGTGACCCTGGAATTTACAAGCAGGATTATATTGATGCTCTTTACATGTATTATCATGAAAAGAAGACTGAAGAAGTTGTTTGTCCTCAAACTCCAGAATGGAAGAGACTTTCTGATCCTGATTTTCATGATGCTGTTGTCCCAACTGTAGAAAATTGTGGGGATGTTCCTCTACATGCATGTGATTTATTCCTTATTGAGGGACATGCTTTTGTTTAG 555 0.3928 MMVCDACWLDCPAYGQEIGCIIPSKVPLGESFDDIIPSQKYSPKQAILQQRLLGKEIGLVIDLTNTTRYYPLSDWTGEGIGHVKRGCLLALQGILLVLVDSLPEAINKFAWACDPGIYKQDYIDALYMYYHEKKTEEVVCPQTPEWKRLSDPDFHDAVVPTVENCGDVPLHACDLFLIEGHAFV 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1318 184 Gene3D Protein tyrosine phosphatase superfamily 94 157 IPR029021 -
Glsi08g1318 184 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 8 147 IPR029021 -
Glsi08g1318 184 PANTHER MRNA-CAPPING ENZYME 8 151 - -
Glsi08g1318 184 Gene3D Protein tyrosine phosphatase superfamily 4 89 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1318 Glsi-ChrGlsi08 9547657 9551620 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1318 8 159 Protein tyrosine phosphatase (PTP) family AT5G01290 43.719 4.48e-45 155