Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1310 ATGTGGGATGAGTGGGACGACAGCATCCCTGAAGCTGACCGACCTGACCAAGATTCCCATCTCAACTTCGATTTCTTATCTTCTCTGTCCAAGCCCAAGGACTATTATAAGATTTTGGAAGTGGATTATGATGCTACAGATGACGCTATTCGTTCCAATTACATTCGTTTAGCTCTGAAATGGCATCCGGACAAGCAGAAAGATCAAGATGCCGCAACCTCAATATTTCAAGAGATAAACGAGGCCTATCAGGTTTTGAGTGATCCTGTCAAAAGGAGGGAATATGACATAAATGGGATGCTTTACGTCTATGATTACAATCTCATTGATTATCTAAATCGTTACAAGGGCCTTATATTGACGTGTAATGGTCTTGGCTTAAAGCATTCCATATGGTAA 399 0.411 MWDEWDDSIPEADRPDQDSHLNFDFLSSLSKPKDYYKILEVDYDATDDAIRSNYIRLALKWHPDKQKDQDAATSIFQEINEAYQVLSDPVKRREYDINGMLYVYDYNLIDYLNRYKGLILTCNGLGLKHSIW 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1310 132 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 132 - -
Glsi08g1310 132 CDD DnaJ 34 88 IPR001623 -
Glsi08g1310 132 Pfam DnaJ domain 34 96 IPR001623 -
Glsi08g1310 132 PRINTS DnaJ domain signature 36 54 IPR001623 -
Glsi08g1310 132 PRINTS DnaJ domain signature 71 91 IPR001623 -
Glsi08g1310 132 PRINTS DnaJ domain signature 54 69 IPR001623 -
Glsi08g1310 132 FunFam Chaperone protein DNAj, putative 26 113 - -
Glsi08g1310 132 ProSitePatterns Nt-dnaJ domain signature. 76 95 IPR018253 -
Glsi08g1310 132 SUPERFAMILY Chaperone J-domain 29 119 IPR036869 -
Glsi08g1310 132 Gene3D DnaJ domain 25 108 IPR036869 -
Glsi08g1310 132 SMART dnaj_3 33 91 IPR001623 -
Glsi08g1310 132 ProSiteProfiles dnaJ domain profile. 34 99 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1310 Glsi-ChrGlsi08 9472546 9474626 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1310 27 96 C2H2 Transcription Factor Family AT1G74250 44.000 4.44e-11 57.4