Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1307 ATGGCACCCAGTTTCGATAGTGTTTCAAGTCTTCTCTGTGCAGAAGACAACAGCATATTCAATGACAACGATTATAGAGGCACTATGGAGCTGTTCGAGGATACATGGCGTCAGAGATATCATCGACTCCATCCCCAAAATCTGTACTTTCATGACCAACATGGGTTGCCATTGCTGAGTGACGAGTGTTTAGCGCTAATGGTGAAAAAGGATTGCGAACACTTGCCTGCTGGCGATTACTTGAACAGGCTACGGACTGGGGATTTGGACTTTGGAGCCAGAAAGCAGGTCATCGATTGGATTGAAAAGGTTCGAGTGCATTTCGGTTTCGGACCCCTCTCTGCATATCTATCCATAAACTACCTGGATCGCTTCCTTTCTGCCTATGCATTACCAAAGGGAAGAGCTTGGACAATGCAATTGTTGGCTGTGGCATGCTTGTCTTTGGCAGCCAAAATAGAGGAGACTGAAGTTCCCCTGTCTCTTGATTTGCAGGTGGGTGAATCGAAGTTTGTATTCGAAGCTAGAACAATACAGAGAATGGAGCTTCTGGTACTGAGCACGCTGAGGTGGAGAATGCAAGCAATTACCCCTTTCTCCTTCATAGACTATTTTCTTTGCAAGATCAATGATGATCAAAGCCCACAAAGATCTTCAATTTTGCGATCCATCCAAGTTATATTGAGCACAGTAAGAGGGATTGATTTCTTGGAATTCAGGCCATCAGAAATTGCAGCAGCTGTGGCAATATATGTTGTTGGGGAAACCCAAACGATTGACACAGAGAAAGCAATTTCTGTTCTGATTCAACACGTAGAAAAGGAGAGAGTGTTGGAGTGCTTTAATATGATCCGCGAGTTAAGCGGTTTTGCCAAGGTGACAAGTGCTTCTGACCCTTATGTGGCCCGAAGCCCAATAGGAGTGTTGGATGCTGCAAGCTTCAGCTATAAAAGCGATGACACGAATGCTGGTTTATGTGCAAATTCTTCACATAGTAGCCCTGATGCTAAAAGGAGGAAGCTAAACAAAAACTGTGGAGTAGAGCTATTGTAG 1053 0.4444 MAPSFDSVSSLLCAEDNSIFNDNDYRGTMELFEDTWRQRYHRLHPQNLYFHDQHGLPLLSDECLALMVKKDCEHLPAGDYLNRLRTGDLDFGARKQVIDWIEKVRVHFGFGPLSAYLSINYLDRFLSAYALPKGRAWTMQLLAVACLSLAAKIEETEVPLSLDLQVGESKFVFEARTIQRMELLVLSTLRWRMQAITPFSFIDYFLCKINDDQSPQRSSILRSIQVILSTVRGIDFLEFRPSEIAAAVAIYVVGETQTIDTEKAISVLIQHVEKERVLECFNMIRELSGFAKVTSASDPYVARSPIGVLDAASFSYKSDDTNAGLCANSSHSSPDAKRRKLNKNCGVELL 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1307 350 FunFam D2/4-type cyclin 77 190 - -
Glsi08g1307 350 CDD CYCLIN_AtCycD-like_rpt1 93 191 - -
Glsi08g1307 350 Gene3D - 77 194 - -
Glsi08g1307 350 SUPERFAMILY Cyclin-like 56 193 IPR036915 -
Glsi08g1307 350 Pfam Cyclin, C-terminal domain 196 291 IPR004367 -
Glsi08g1307 350 SMART cyclin_7 99 187 IPR013763 -
Glsi08g1307 350 PANTHER CYCLINS 69 289 IPR039361 -
Glsi08g1307 350 Pfam Cyclin, N-terminal domain 64 193 IPR006671 -
Glsi08g1307 350 CDD CYCLIN_AtCycD-like_rpt2 196 284 - -
Glsi08g1307 350 ProSitePatterns Cyclins signature. 94 125 IPR006671 -
Glsi08g1307 350 SMART Cyclin_C_2 196 317 IPR004367 -
Glsi08g1307 350 FunFam D6-type cyclin 191 282 - -
Glsi08g1307 350 Gene3D - 66 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1307 Glsi-ChrGlsi08 9456346 9458355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1307 41 327 Core Cell Cycle Gene Families AT2G22490 47.213 1.11e-82 254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1307 08 9456346 9458355 Glsi08g1307 08 9456346 9458355 ECH