Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1305 ATGGAAAAAGATTGTGGAACCTGGATACCACAGCTGCATTTTGATTGGCAATCACCCAACTTGAGTTCCTTTGGTGCTCCCCTTGATGTTGGGAAGCAAAATGGTATTTCTGCATTTATGAACCCTGGCATTGATGAGGTCGCGAGAAATGAGACAATAACAGGTTATGCTTCCTCTGCCCAACCTCATTTGCAGTTAGGACATTCCAATGAACCTCGTGGCTGGTTTTACTGTTTACCTCGCTTTCGACAGGCATTTATGCCTGCTCCAAACTTCACTGTGGAGGAAAAACTCCCTGCTGGCCATGTGAAAGGTTTTAGGGAGGAAGTCGCGCCCAATGGGGAATCGCGCCTCCCTCAGAAGCAATTCCTGGTTATCGACCAGACGGGTGATCACACAACTTTCATTTATGATTCTGGCTTTAGAAGTTCCTTCGAGTGCCTTGCTTCTTGGCATTCCAAACTGTATGGCCCACGAAATTTGAATGGGAATGAACATTCTTTTAGAAGAGATCTGAATGATTTTATCGGACCGACTTTCGGTGATAAAGTTGAAGAAAATCAGGGGACGGAGATGGAAAGTGAGATGCACGAAGATACAGAAGAAATCAATGCATTGCTTTACTCTGACTGTGATGGTTACTCTACCGAGGATGATGAAGTTACTAGCACAGGGCATTCGCCCAGTACAATGACCACTCATGACAGCCAAGAAATCTATAGGGGAACCACCCAAGAAGTTGCGAGCTACGCTGGAAAATCAAGGAAACGGAAGCTATCAGACGGCGTTTGTAGTGACATGCAACTTACTGACACTGCCAGTTCTCTGAATCTGAACACACTCTACGACAATGGAGATGATGCGGAGTCAAGATGTTCTAGTGGCAACTGCCAGGGGTCAGGGGAAATGGGTTCCTTGGCGGGCAATAAGAAGATGAGAAAGGAGAAGATAAGAGATGTTCTGAAGATTCTGCAAAGCATTGTTCCTGGTGGGAACGACAAGGACCCTATCGAGCTTCTCGATGAAGCAATACGTTGTTTGAAATCCTTGAAACTCAAGGCTAGCGCTCTCGGAGTTGCTGCCTTGAGTTTGCAGAATAAAGAAGGTAAAGGTGGGTTGTGTTTGGGGGGGAATTCCATTATATTTAAAGACTTGTTCCGCAAAGGAGGTATGAAGTGTGAGACGAATATGGTGGGGGAATGA 1203 0.4572 MEKDCGTWIPQLHFDWQSPNLSSFGAPLDVGKQNGISAFMNPGIDEVARNETITGYASSAQPHLQLGHSNEPRGWFYCLPRFRQAFMPAPNFTVEEKLPAGHVKGFREEVAPNGESRLPQKQFLVIDQTGDHTTFIYDSGFRSSFECLASWHSKLYGPRNLNGNEHSFRRDLNDFIGPTFGDKVEENQGTEMESEMHEDTEEINALLYSDCDGYSTEDDEVTSTGHSPSTMTTHDSQEIYRGTTQEVASYAGKSRKRKLSDGVCSDMQLTDTASSLNLNTLYDNGDDAESRCSSGNCQGSGEMGSLAGNKKMRKEKIRDVLKILQSIVPGGNDKDPIELLDEAIRCLKSLKLKASALGVAALSLQNKEGKGGLCLGGNSIIFKDLFRKGGMKCETNMVGE 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1305 400 PANTHER TRANSCRIPTION FACTOR BHLH145 8 360 IPR037546 -
Glsi08g1305 400 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 311 357 IPR036638 GO:0046983
Glsi08g1305 400 MobiDBLite consensus disorder prediction 216 235 - -
Glsi08g1305 400 MobiDBLite consensus disorder prediction 218 235 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1305 Glsi-ChrGlsi08 9446015 9447304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1305 74 354 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50010 33.451 1.20e-27 109