Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1277 ATGCTATCATATTCGCTTGTCCTGCTGAATCCAACGGCCCAAATTGAGTGTCCCAAATCGCTCCCTTCCCGGCCCTCAACGCAATTATCGCTCCCATTTGGCCCTCAAAAACCGCCCTCGCTTCCCCGCCCCCCTCCTTCTCTCATTTTCAAGTTCAACTCAATCCCTTACCAGATCTCTCACTCTCTCTCGGATTCGACTATGGCGGCCACTCCCTCGCCTCGCGAAGAGAACGTCTACATGGCCAAGCTTGCCGAACAGGCCGAGCGCTATGAAGAGATGGTCGATTTCATGGAGAAAGTCTCCGCCGCCGTCGACAACGAAGAACTTACGGTTGAAGAGAGGAACCTCCTCTCTGTCGCCTACAAGAACGTCATCGGTGCTCGCCGTGCCTCCTGGCGTATTATTTCCTCCATCGAGCAGAAGGAGGAGAGCCGTGGCAACGAGGATCATGTCTCCATGATCCGCGACTACCGATCCAAGATCGAGACTGAGCTCTCCAACATATGTGATGGGATCCTTAAACTCCTCGATTCCCGCCTCATCCCCTCCGCTACCTCTGGTGATTCCAAGGTCTTTTACCTTAAGATGAAGGGCGATTACCATAGGTACCTCGCCGAGTTCAAGACTGGAGCCGAGCGCAAGGACGCTGCCGAGAGCACCCTCACCGCTTACAAATCTGCTCAGGACATTGCGAATGCCGAACTGCCTCCTACTCATCCGATTAGGCTCGGTCTTGCCCTGAATTTCTCTGTGTTTTACTATGAGATTCTTAACTCGCCTGATCGCGCTTGCAACCTTGCAAAACAGGCTTTTGATGAAGCAATTGCTGAATTGGATACATTGGGAGAGGAGTCATACAAGGATAGCACTTTGATAATGCAACTTCTTCGTGATAATCTCACCCTCTGGACCTCCGACATGCAGGATGATGGAGCGGATGAAATTAAAGAAGCAGCACCTAAACGTGATGACGAACCACAATAA 987 0.5157 MLSYSLVLLNPTAQIECPKSLPSRPSTQLSLPFGPQKPPSLPRPPPSLIFKFNSIPYQISHSLSDSTMAATPSPREENVYMAKLAEQAERYEEMVDFMEKVSAAVDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSMIRDYRSKIETELSNICDGILKLLDSRLIPSATSGDSKVFYLKMKGDYHRYLAEFKTGAERKDAAESTLTAYKSAQDIANAELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAPKRDDEPQ 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1277 328 Coils Coil 81 101 - -
Glsi08g1277 328 ProSitePatterns 14-3-3 proteins signature 1. 115 125 IPR023409 -
Glsi08g1277 328 Gene3D - 56 318 IPR036815 -
Glsi08g1277 328 ProSitePatterns 14-3-3 proteins signature 2. 287 306 IPR023409 -
Glsi08g1277 328 PANTHER 14-3-3 PROTEIN 75 309 IPR000308 -
Glsi08g1277 328 MobiDBLite consensus disorder prediction 19 34 - -
Glsi08g1277 328 MobiDBLite consensus disorder prediction 19 41 - -
Glsi08g1277 328 SUPERFAMILY 14-3-3 protein 74 307 IPR036815 -
Glsi08g1277 328 Pfam 14-3-3 protein 81 305 IPR023410 -
Glsi08g1277 328 PRINTS 14-3-3 protein zeta signature 251 277 IPR000308 -
Glsi08g1277 328 PRINTS 14-3-3 protein zeta signature 224 250 IPR000308 -
Glsi08g1277 328 PRINTS 14-3-3 protein zeta signature 109 138 IPR000308 -
Glsi08g1277 328 PRINTS 14-3-3 protein zeta signature 189 211 IPR000308 -
Glsi08g1277 328 PRINTS 14-3-3 protein zeta signature 278 307 IPR000308 -
Glsi08g1277 328 PRINTS 14-3-3 protein zeta signature 158 182 IPR000308 -
Glsi08g1277 328 CDD 14-3-3_plant 75 311 - -
Glsi08g1277 328 SMART 1433_4 75 318 IPR023410 -
Glsi08g1277 328 FunFam 14-3-3 protein epsilon 71 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1277 Glsi-ChrGlsi08 9300175 9302444 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1277 72 328 14-3-3 family AT1G78300 91.085 1.22e-172 478
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1277 08 9300175 9302444 Glsi08g1277 08 9300175 9302444 ECH