Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g1260 ATGGACAAATTATGCTGTTTTAAATCTTCCTACTCTCAGCTTGTAGCCACACGTTCTTCATCCAGCACAGGTAAGGGGAAAAACCATGAAGGATCAATAAAGTATGGTTTCAGCCTAGTAAAAGGGAGAGCTAATCATCCAATGGAGGATTATCATGTTGCCAAGTTTGTGCATATACAGGGGAAAGAATTGGGATTATTTGCTATATATGATGGCCACCTAGGAGAACGTGTTCCCGCCTACCTACAGAAAAATTTGTTTACCAACATACTAAAGGAGGAGGAATTTTGGGATGACCCCTCTGGATCTATCTCAAAAGCATATGAGAGGACAGATCAGGCAATTCTTTCACGTAGTTCTGATTTGGGGCGTGGCGGATCAACAGCTGTAACTGCAATATTGATTAATGGCCAAAGGTTATGTGTAGCTAATGTTGGAGACTCACGAGCAGTTCTTTCAAGAAGGGGTCGAGCAGTACAAATGACTACAGATCATGAGCCTAACACAGAACGAGGCAGCATTGAGACTAAAGGTGGTTTTGTCTCCAACATCCCAGGTGACGTGCCTAGAGTAAATGGGCAACTGGCTGTTTCTCGCGCATTTGGAGACAAGAGCCTCAAGTCACACTTGCGGTCAGACCCTGATGTACAGACCACTGATGTAGATGTTGATACTGATTTTCTGATTCTTGCAAGCGATGGACTTTGGAAGGTAATGTCTAATCAGGAGGCAGTGGATATTGCTAGAAGGATGAAAGAACCACAGAAAGCAGCCAAGCAGTTAACGGCTGAAGCACTAAAAAGAGACAGTGAAGACGATATATCCTGCGTTGTGGTTAGACTTAGGCGATGA 852 0.4378 MDKLCCFKSSYSQLVATRSSSSTGKGKNHEGSIKYGFSLVKGRANHPMEDYHVAKFVHIQGKELGLFAIYDGHLGERVPAYLQKNLFTNILKEEEFWDDPSGSISKAYERTDQAILSRSSDLGRGGSTAVTAILINGQRLCVANVGDSRAVLSRRGRAVQMTTDHEPNTERGSIETKGGFVSNIPGDVPRVNGQLAVSRAFGDKSLKSHLRSDPDVQTTDVDVDTDFLILASDGLWKVMSNQEAVDIARRMKEPQKAAKQLTAEALKRDSEDDISCVVVRLRR 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g1260 283 Gene3D - 29 283 IPR036457 -
Glsi08g1260 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
Glsi08g1260 283 SMART PP2C_4 30 279 IPR001932 -
Glsi08g1260 283 MobiDBLite consensus disorder prediction 156 178 - -
Glsi08g1260 283 CDD PP2Cc 33 281 IPR001932 -
Glsi08g1260 283 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Glsi08g1260 283 FunFam Probable protein phosphatase 2C 39 25 282 - -
Glsi08g1260 283 PANTHER PROTEIN PHOSPHATASE 27 281 IPR015655 GO:0004722|GO:0006470
Glsi08g1260 283 SMART PP2C_SIG_2 45 281 IPR001932 -
Glsi08g1260 283 Pfam Protein phosphatase 2C 43 274 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g1260 Glsi-ChrGlsi08 9176139 9178369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g1260 1 282 PP2C-type Phosphatase Gene Family AT1G22280 72.222 4.98e-149 417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g1260 08 9176139 9178369 Glsi08g1260 08 9176139 9178369 ECH